Shewanella psychrotolerans: K0I62_08195
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Entry
K0I62_08195 CDS
T09306
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
spsj
Shewanella psychrotolerans
Pathway
spsj03030
DNA replication
spsj03430
Mismatch repair
spsj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spsj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K0I62_08195 (dnaX)
03430 Mismatch repair
K0I62_08195 (dnaX)
03440 Homologous recombination
K0I62_08195 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spsj03032
]
K0I62_08195 (dnaX)
03400 DNA repair and recombination proteins [BR:
spsj03400
]
K0I62_08195 (dnaX)
Enzymes [BR:
spsj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
K0I62_08195 (dnaX)
DNA replication proteins [BR:
spsj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
K0I62_08195 (dnaX)
DNA repair and recombination proteins [BR:
spsj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
K0I62_08195 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNA_pol3_tau_5
DNAX_ATPase_lid
AAA
AAA_22
RuvB_N
AAA_16
AAA_5
PIF1
AAA_14
AAA_assoc_2
ResIII
TsaE
AAA_2
AAA_7
AAA_18
Mg_chelatase
Motif
Other DBs
NCBI-ProteinID:
QYK02901
LinkDB
All DBs
Position
1839916..1842618
Genome browser
AA seq
900 aa
AA seq
DB search
MSYQVLARKWRPATFEQVVGQSHVLHALTNALMQNRLHHAYLFSGTRGVGKTSLARLFAK
GLNCEQGITASPCGECASCVEIAQGRFVDLIEVDAASRTKVDDTRELLDNVQYRPSRGRF
KVYLIDEVHMLSRSSFNALLKTLEEPPEHVKFLLATTDPQRLPVTVLSRCLQFNLKSLTL
DEICLQLANILGHEAISFDDGAIKLLAKAANGSMRDALSLADQAIAFGAGQVTLSQVQTM
LGTIDEHYVIVLLNALCDGDVANLMQVTDEVLSFGADPFEVLRSLLELLHQITLTQFAPA
AAQLSKYTEQIKAFASQLRPEQVQLYYQLLLTGRKDLPHAPDPKSGLEMALLRAVAFVPE
APIKQWQGEPSSGVTLPEINAGVGKSVSDNDTGLNNKTAVIAQPSEVELKAEASVPHSTK
LDEVGESEESTDTDALIAEQALILSQAASQGMNQVADSDSDSDSDASVAADSNSTGIDAT
QNKTSSKPEVSQSDAAEADLFQQGMFEQSMTDDVYIYDGELDEQDPSDYEAYLASQAEDT
NTTLTVSPAKALAGSSTVDSATEVATDEAVPVEDDLLDAVLAARQFLLTDLDETSSKESD
TKKPEVGRQAYVPPKRSTDVNNKHNESAQAQEQIPQGGEAADDSDGSHPVTSLTAESLDD
RPPWEAPAETAPVAEQYVDEGQLPQNVSPQAGNDSVTEADETESEPEPEPIEYQQLTSST
DVVAVDTSVSAARDESWHSEVISHEVTGDSTDLKWYRLMSALDIGGRVRQLAVNSVCRQF
VDPLPLVLKPNQKHLESPGPVAQLEEALGKALGAPCQVVFSVGVEQGRETPLEVRQRFHK
ELLVQAHQGLINDDNIRWLTQTMNVEMDPDSLSYSPELLGKRGHVIELIDKSNFIEQVES
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atgtcataccaggtgttagccagaaaatggcgccctgccacgtttgagcaagttgtaggc
cagtctcatgttttacatgctttgacgaatgcattaatgcaaaaccgtttacatcatgct
tatctgttttcaggcacccgaggcgtgggtaagacgagtcttgcgcgtttatttgctaaa
ggacttaattgtgaacaagggatcaccgcttctccctgcggtgaatgtgcaagttgtgtt
gagattgctcaggggcggtttgttgatctgattgaggtggatgccgcttcacgtactaag
gtcgacgacacccgcgaactactcgataatgtgcaatatcgtccatcccgtggtcgtttt
aaagtctacttaattgatgaagtgcatatgctctcaagaagcagttttaatgcgctgctc
aagacgttagaagagcctcctgaacatgttaaatttctcttggccacgacagatccgcaa
cgattgcccgtcacggtattatctcgctgtttgcaatttaacttaaaaagtctcaccctc
gatgagatttgtcttcagttagcgaatattctggggcatgaggcgatctcttttgatgat
ggcgcgataaaactgttagctaaggctgccaatggcagtatgcgtgatgccctgagcctt
gccgatcaagcaattgcctttggtgcggggcaagtgactttatctcaagtgcaaaccatg
ctcggtaccatagatgagcattacgttatcgtgctgcttaacgccttgtgtgacggtgac
gttgccaatttaatgcaagttacagatgaagtgctctcttttggcgccgatccatttgaa
gtgctgcgcagtttattggagctgttacaccaaataaccctcacgcaatttgcaccagct
gcggcgcagttgtctaaatataccgagcaaataaaagcgtttgcgtctcagcttagacca
gagcaagtacagctttattatcagctgttattaactgggcgcaaagatctcccacatgct
ccagatcctaaatcgggtttagagatggcgctgctgcgagccgttgcttttgtccccgaa
gcgcctattaagcagtggcaaggtgagcctagtagcggcgttaccttacccgaaattaac
gccggtgtaggtaaatcagtcagtgacaatgatactgggttaaacaataagacggctgtg
attgctcagccatcagaggttgagctaaaagctgaggcttcagtgccacattcaaccaag
cttgatgaggttggagaaagtgaagagagcacagataccgatgcgctcattgccgagcaa
gcactgattttaagtcaagcggctagccaaggcatgaatcaagttgctgacagtgacagt
gacagtgacagtgatgcgagcgttgccgcagactcaaattctactggcattgacgctaca
caaaataaaacctcatccaagcctgaagtgtcacaatcagatgccgcggaagccgatctt
tttcagcaggggatgttcgaacagagcatgaccgatgatgtttatatctatgatggagag
cttgacgaacaagatcccagcgattatgaggcttatcttgcgagtcaggctgaagatacc
aatacgactttaacggtttcacctgctaaagcgttagcgggatcttcaacagttgatagt
gctactgaggtggctaccgatgaagcagtgccagttgaagatgacttactcgatgccgtt
ctcgccgctcgtcagtttttgttaaccgacttagatgaaacatcatctaaggagagtgac
acaaaaaagcctgaggttggacgacaggcctatgtgccgcctaagcgcagtactgatgta
aacaataagcacaacgaaagcgcgcaagcgcaagagcaaataccacaaggtggcgaagcg
gcagatgatagcgatggatcccatcctgttacctcgctaactgctgagtcacttgatgat
aggccgccttgggaagcaccagcagaaacagccccagtggctgaacagtatgttgatgaa
ggccaattgccgcaaaatgtatcgcctcaagccggaaatgactctgtcactgaagctgat
gaaactgagtctgagcctgagcctgagcctattgaatatcagcagctgacatcatcaacc
gatgtcgtagcagttgatacgtcagtatctgcggcgcgagatgaatcgtggcactctgag
gtgataagtcatgaagtgaccggggatagtaccgatttaaaatggtaccgactgatgtca
gccctcgatattggtggacgtgtacgccagcttgcggttaattcggtatgtcgacagttt
gtcgatcctttgcctttggtgttaaaacccaatcaaaagcatttagagtctccagggcct
gtagcgcaacttgaagaagcattgggcaaagcgctgggagcaccatgtcaggtcgtattt
tcggttggcgttgagcaagggcgtgagacgccattagaagttcgtcaacggtttcacaaa
gagttattagtgcaggcccatcaaggccttatcaatgatgataatattcgttggttaact
caaaccatgaatgtcgagatggatcccgatagtttaagttattcccctgaattactcggt
aaacgcggccatgtgattgaacttatcgataagtcgaactttattgagcaagtcgagtca
taa
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