Shewanella psychrotolerans: K0I62_10650
Help
Entry
K0I62_10650 CDS
T09306
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
spsj
Shewanella psychrotolerans
Pathway
spsj03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
spsj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
K0I62_10650 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spsj03400
]
K0I62_10650 (uvrB)
DNA repair and recombination proteins [BR:
spsj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
K0I62_10650 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
K0I62_10650 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
AAA_22
AAA_16
Kinesin
DUF87
AAA
Ish1
CENP-F_N
Motif
Other DBs
NCBI-ProteinID:
QYJ99915
LinkDB
All DBs
Position
complement(2414150..2416168)
Genome browser
AA seq
672 aa
AA seq
DB search
MSDSTFQLVSRYQPAGDQPTAIQKLVEGIESGLACQTLLGVTGSGKTFTVANVIKQLQRP
TIIMAPNKTLAAQLYGEMKEFFPHNAVEYFVSYYDYYQPEAYVPSTNTFIEKDASVNAHI
EQMRLSATKALLERKDVVLIASVSAIYGLGDPDSYLKMLLHLRLGDFMGQREILQRLSEL
QYTRNDIELQRGTFRVRGEVIDIFPADSDKDAIRIELFDDEIDRLSLFDPLTGHILQRIA
RTTVYPKTHYVTPREKILAATEEIKQELRERKKYLLDNNKLIEAQRISERVQYDIEMMTE
LGYCSGIENYSRYLSGRRPGEGPPTLLDYLPADGLLIIDESHVTVPQIGAMYKGDRSRKT
NLVDYGFRLPSALDNRPLKFEEFESLMPQTVFVSATPAQYEIDKSDGEIAEQVVRPTGLL
DPEIEVRPVSIQVDDLLSEVGKRVAVNERVLVTTLTKRMAEDLSEYLDEHGVKVRYLHSD
IDTVERVEIIRDLRLGVFDVLIGINLLREGLDMPEVSLVCILDADKEGFLRSERSLIQTI
GRAARNVNGKVILYGDKITKSMAKAIDETDWRREKQRQYNLNNGITPQGLSNKITDVMDI
GGHNEHTAKVLPRYQRVAEAKANYQLGDAASLSHQIDELEKRMHQHARDLEFEQAAALRD
QVLNLREALIKA
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
ttgagtgattcgacatttcagctagtttcgcgatatcagcccgcgggagatcaaccgacg
gctattcaaaagttggtggaaggcatagagtctggtttggcttgtcagacactgctgggg
gtaacgggatcgggtaagacgtttacggtcgccaatgtaattaagcaattacagcggcct
acgattatcatggcacctaataaaaccctggcggcacaactatacggtgagatgaaagag
tttttccctcacaacgctgttgagtattttgtctcctattacgactactaccagcctgaa
gcctatgtgccgtcaacgaacacctttattgaaaaggacgcatcggttaatgcccacata
gagcagatgcgtttatcggcgaccaaagcgcttttagagcgtaaagatgtggtgttgatt
gcttcggtctcggctatttatggtcttggcgatcctgactcgtaccttaagatgctgtta
catcttcgtctgggtgactttatggggcagcgtgaaatattgcagcgcctaagtgaactt
caatatacccgtaatgatattgaactgcagcgcggcacttttcgggtgcgcggagaggtg
attgatattttcccagcggattcggataaagatgcaatacgtatcgagctgttcgatgat
gagatcgaccgattaagtttgttcgatccattaactgggcatattctacagcgcattgcc
cgtaccactgtttatcccaagacccattatgttacgccgcgagagaagattttggcggca
accgaagagattaagcaggagctgcgggaacgtaaaaagtatctattagataataataag
cttatcgaggcccaacgcatctctgagcgagtgcagtatgatattgagatgatgaccgag
ctgggttattgctccgggatagaaaactattcacgctatctctcagggaggagaccagga
gaggggccaccgaccttgctcgattacctccccgccgatggattacttattatcgatgag
tcccatgttaccgtgccccaaattggcgccatgtataaaggtgatcgctctcgtaaaaca
aacttagtcgattatggttttcgcttaccgtcagcgctagataatcgtccgttgaaattt
gaagagtttgaatccttaatgccacagacggtatttgtatcggcgacaccggcgcaatat
gagatagataaaagcgacggggaaattgccgaacaagtagtgcggccaaccgggctgctt
gatcctgagattgaagtgcggcccgtttcgatacaagtagacgacttgctgtcagaggtg
ggtaagcgagttgccgttaatgagcgggtattggtgacgacattaaccaaacgtatggcc
gaagatctgtcggaataccttgatgagcatggcgttaaagtcagatatttgcattctgat
attgataccgtagagcgggttgagatcattcgtgatcttcgtttaggtgtgtttgatgtc
ttgatcggtattaacttgctcagggaaggcttggatatgcctgaagtgtcgcttgtgtgt
atcttagatgctgataaagaggggttcttacgttcagagcgatcccttattcagactatt
ggtcgtgccgcccgtaatgttaacggtaaagtgattttatatggcgataagatcactaag
tccatggccaaggccatcgatgaaactgactggcgacgagaaaaacagcgccagtataat
cttaataatggcattacgcctcaaggattgtcgaacaaaatcaccgatgtgatggatatt
ggcggccataatgaacatacggcgaaggtgttacctcgttatcaaagagtcgctgaggct
aaggcgaactatcaacttggcgacgccgctagcttgagtcaccaaattgacgaattagaa
aaacgtatgcatcaacacgcgagagatcttgagtttgagcaggcggcggcattacgtgat
caggtgctgaatttaagagaggcgttaattaaggcatga
DBGET
integrated database retrieval system
