Shewanella psychrotolerans: K0I62_11110
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Entry
K0I62_11110 CDS
T09306
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
spsj
Shewanella psychrotolerans
Pathway
spsj00470
D-Amino acid metabolism
spsj00550
Peptidoglycan biosynthesis
spsj01100
Metabolic pathways
spsj01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
spsj00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
K0I62_11110
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
K0I62_11110
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
K0I62_11110
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
spsj01011
]
K0I62_11110
Enzymes [BR:
spsj01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
K0I62_11110
Peptidoglycan biosynthesis and degradation proteins [BR:
spsj01011
]
Precursor biosynthesis
Amino acid ligase
K0I62_11110
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
CPSase_L_D2
RimK
Motif
Other DBs
NCBI-ProteinID:
QYJ99996
LinkDB
All DBs
Position
2525652..2526668
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AA seq
338 aa
AA seq
DB search
MSPINLLLLCGGGGDEHAISLLSANYFETSLAKLDHINVLRVELDAKGQYTTKSGEPCEL
NNRKEIRFEDAAISPWPVDYVIPCIHGYPGETGDIQSYFDLINLPYFGCDSEGSSNCFNK
ITAKMWFTALGIPNTPYIFLNQLDEESIEQTHNALKQWGSIFIKAASQGSSVGCYRVDNV
GEIEQTLTDAFRYAPYVVVEKTIKARELEVAVYQYKGKTVATLPGEVICASDTFYTFDEK
YAADSKATTKVVAEVSDAIATQIQQYAIKVFDGMKLRHLSRIDFFLTEDGEILLNEINTF
PGLTPISMFPKMLANHGDDFSQYLNETINNGIEDKCVR
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgagtccgataaatcttttacttttgtgtggcggtggtggtgatgaacacgccatctca
cttttatcagctaactattttgaaacctcattggctaaactcgaccacatcaatgtgttg
cgtgttgaactggatgctaagggtcaatacaccaccaagtccggtgagccgtgcgagctg
aataaccgcaaagagatccgttttgaagacgctgcaatctcaccttggccggtggattat
gttattccatgtatccatggctatccaggcgaaactggtgatattcagtcctattttgac
ctgatcaatctgccttactttgggtgtgactctgaagggtcgagtaattgcttcaacaag
atcaccgctaagatgtggtttacggcacttgggatccctaatacgccctatattttcctc
aaccaactcgatgaggagtcaatcgagcagactcacaatgcgcttaagcagtggggatct
attttcattaaggcggcatcacaaggttcttcggttggctgttatcgtgtcgacaatgtt
ggtgaaattgagcaaaccttaaccgatgcatttcgttatgcaccttacgttgtcgtagaa
aaaaccatcaaggcgcgtgagcttgaagttgctgtgtatcagtacaaagggaaaacagtc
gcgacactgccaggtgaagtcatttgcgccagtgatacgttttataccttcgatgaaaaa
tatgcggccgatagcaaggcgaccactaaggtggtcgcagaggtttcagacgctatcgcc
acgcaaattcagcagtatgccatcaaggtttttgacggcatgaagttacgtcatctgtca
cgcattgactttttcttaactgaagatggggaaatattattgaatgagatcaataccttt
ccaggactcacgccaatttcgatgtttccaaagatgctcgccaaccacggagatgatttt
agccagtatctgaatgaaacgatcaataatggcatcgaggacaagtgtgttagatag
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