Shewanella psychrotolerans: K0I62_11315
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Entry
K0I62_11315 CDS
T09306
Name
(GenBank) translocation/assembly module TamB domain-containing protein
KO
K09800
translocation and assembly module TamB
Organism
spsj
Shewanella psychrotolerans
Brite
KEGG Orthology (KO) [BR:
spsj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spsj02000
]
K0I62_11315
Transporters [BR:
spsj02000
]
Other transporters
Pores ion channels [TC:
1
]
K0I62_11315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
Yop-YscD_ppl_1st
Motif
Other DBs
NCBI-ProteinID:
QYK00029
LinkDB
All DBs
Position
2574578..2578477
Genome browser
AA seq
1299 aa
AA seq
DB search
MIDQSNELDLAQTDNQGAVPASPLTPFKRLLGWLRNLIRLVFYLPLALLIMLALMFGTPL
GTRVSVILADALVPNLSVSYSAGRLNGQLTLAHAHWQMAGIVVDTQDLTLNWRPLCLLQR
QLCVDTLSASAVQVDIDTDELKGKDDNQALAEESIKDEGAEPIKEEVTEADEQQLVLPFG
ILLNQGDLKQVKVRVNQMQFNADALTAKASWLETGLRVNQLASQGLYIDIPLSAETDKAA
DADQADADSWPLTQLPEVAIPMPIFVDTAELTDSELRLGQRIDHFQAFALQGSYVGYKIT
LDSLDVQHDYGKAHLDGHISLEQDYPMALNLQADLASQQLTELPQLKRQQLEAEINGGFA
ALAVTLKGKGHLDLALDGEINLDSPQLPYRVALTSPHLMWPLAEPEYETKILTLNSQGSI
QKQSVTLNGDLKTPYHPWLTLDVEFEHQTKQLSFAKLDVDSEMGKAKLAGQLAYGDKLHW
DLQLDTQTLDLSQLNIATEQPLPETEINGSLHSQGDYSDKQWAIGVSNADLQGHVANYPL
RLQGDIAINDKFQLNAKQLQLNALESELTLSGRVDDNWSLDGQLSVPALSLWDPRASGAI
EAVINVSGDDEHPEIAINADSVELQYADMQVEKAKLIAFYRPQDEHQFALSLKSSDIKRQ
NVSLSTFILGIKGDLNKQKLGLQTDGDIQLQTSIASSYDDKAQRFDANVKRINLKSRLGA
MALDKPIALYWDQQQGYGEVAPFCWQHEAASLCLTDIAELGDKGDTQLQFTGDLGALLSP
ILPDRLTWRGPTQLDALFHWAKGEKPTGEIELAMAPGQVDLSTNRRQINAQYKYLQLSAQ
LTPERFTADAKFESERFAKLNTKVEISTDPEHHLSGQIDLKDINLHALADFTPQLEVLDG
RVSSVITLGGTLESPQLTGSVDLIDGQLAAAANPTLLDNIALTLSLVGQGAKLTSQWTMG
EGKAELEGDLNWQEGLQGDFQFKGDKLAIIQPPLAILDVSPDLTIGFSNKHLDIQGNVDI
PSGHIKIVQLPEGGVAQSDDVIFNDSLSTQVQEKNPIAITSQIMLNVGDKLNIDGMGLRG
MLQGTLELRQAAFKPPLLYGDIRVVNGTYKFMGQTLSINAGEVQFIGPMAVPNLNIEATR
EIKEDDVIAGVRITGTPAKPVVSLFSNPAKEQAEILSYIIKGTGLNNSDSDQNNALMMGA
ALTLGNQLGDNAFSNMSSSASGVIEKLGISNVQLDANDDGKVAISGYIGDDLMVKYGVGV
FNPGYEMTVRYYLMSQLYLESVSGTISKTLDIYYSFDID
NT seq
3900 nt
NT seq
+upstream
nt +downstream
nt
atgattgaccagtccaatgagctagacctggcacaaaccgataaccaaggcgcggtgcca
gccagccccctaaccccctttaaacgtctgcttggctggctacgcaacctgatccgcttg
gttttctatctgcccttagccctactgatcatgctggccttgatgttcggcacccccctt
ggcacgcgcgtgtcagtcatcttggccgatgccttagtgcccaacttgtcggtcagctac
agcgcaggccggctcaacggccaattaaccttagctcatgcccactggcagatggcgggc
atagtcgttgatactcaggatctgacgctcaactggcgtccgctatgtctactgcaacgc
caactttgtgtcgataccttaagtgcctcagcggtacaagtcgacatagatacagatgag
cttaagggtaaggatgacaaccaagcgctagcggaagaatccattaaagatgaaggagca
gagcccatcaaagaggaggtaacagaggccgatgagcagcagctggtacttccctttggc
atattgctcaatcaaggcgatctcaaacaggtcaaggttcgggtcaaccagatgcagttt
aatgccgacgccctcacagccaaggccagctggttagaaacggggctcagggtaaaccaa
ctggccagccaaggactctatatcgatattcccctgtctgcagaaacggacaaggcagca
gacgccgaccaggctgatgccgatagctggcccctcacccagttgccagaggtggccatt
cccatgcctatctttgtcgataccgccgagctcaccgacagcgagctcaggctggggcaa
cgaatcgatcatttccaagccttcgccctgcaaggcagttatgtcggctacaagataacc
ttggacagcctagatgtgcagcatgactatggtaaggcccacctagatggccatataagc
ctagagcaagattaccctatggcgctgaacctgcaggccgatctcgccagtcagcagctc
accgagctgccacagttgaaacgccagcagctagaagcggaaataaacgggggctttgcc
gcactcgcggtaacactaaaaggcaaaggccatttggatctggccctagatggcgaaatc
aacctagacagcccacaactgccctatcgtgtggcgctaaccagcccgcatctgatgtgg
ccgcttgccgagcctgaatatgaaaccaaaatccttacactcaatagccaaggtagtatt
cagaaacaaagtgtcaccctaaacggcgacctgaagaccccttatcacccttggcttacg
ctcgatgtcgagtttgaacaccaaactaagcaactctcgttcgctaagctggatgtcgac
agtgagatgggcaaggccaagctcgcaggacaactggcttatggcgacaaactccactgg
gatctgcaactcgatacccagacactggatctgagccagctcaatatcgccactgagcag
cccctaccagaaacagaaattaacggcagcttgcacagccaaggggactatagtgacaaa
cagtgggcgattggcgtcagcaatgccgatcttcaaggtcacgttgcaaactatccgctg
cggcttcaaggcgatattgccatcaatgacaaattccagcttaatgccaaacagctgcaa
ctcaatgccttagagtccgagctgaccttgtcgggacgtgtcgatgacaactggtctctc
gatggtcagctgagcgtgccagcgcttagcctgtgggatcctcgcgccagtggcgctatc
gaggcggttatcaatgtctctggcgacgatgagcacccagaaattgccatcaatgccgat
agtgtggagctgcaatacgccgatatgcaagtcgagaaggcaaaactgatcgccttctac
cgtccccaggatgagcatcaatttgccctgtcgttaaaatcatccgatatcaaacggcaa
aacgttagtttgagcacctttatcttagggatcaaaggcgatctcaataaacaaaaattg
gggctgcagaccgatggcgatattcagctgcaaacctccatcgcatccagctatgatgat
aaagcccaaagattcgacgccaacgtcaaacgtattaaccttaaatctcgcctaggcgcc
atggcactggacaagcccatagcactctattgggatcagcaacaaggctatggtgaagtc
gcacctttttgttggcaacatgaggctgccagcctttgcctgaccgacattgcagaactt
ggcgacaagggcgatacccagctgcagtttaccggtgatcttggcgcgttgctttcgccc
atcttacccgatcgtctgacctggcggggaccgacccagctcgacgctctatttcattgg
gccaaaggagagaaacctacaggcgagattgaactggcgatggcacccggccaggttgac
ttaagcaccaacagacgccagattaacgcgcaatataagtatctgcagctgagcgcgcag
ctcacccctgagcgttttactgccgatgccaagttcgagtctgaacgtttcgccaagctg
aacaccaaggtggaaattagcacagatcccgagcatcatcttagcggccaaatcgacctg
aaagatatcaacctccatgcgctggcagactttaccccgcagcttgaggtactcgacggc
cgggtgagcagtgtcattacacttggcggcaccctagagagcccgcagctaaccggctca
gtcgacctcatcgacgggcaattagccgccgcggctaacccgacgctgctggacaacata
gcgctaacgctctcactcgtgggccaaggggctaaactgacgagccagtggacgatgggc
gaaggcaaggcagaactcgaaggggatctgaactggcaagagggtctacaaggagatttt
cagttcaaaggcgataaacttgccattattcaaccgccgctggctatcttagatgtctca
ccagatctcaccataggctttagcaacaagcacttagatatccaagggaatgtagatatc
ccttcaggccatatcaagatagtacagttgcccgaaggtggtgtggcccaatcggacgat
gtgatctttaacgacagtctgtcgacccaagtgcaggaaaaaaatcctatcgctattacc
agtcaaatcatgctcaatgtgggtgacaagctcaacattgacggcatggggctacggggc
atgctacagggaaccctagaactgcgccaagcggcctttaaacctcctctgctctacggt
gacatcagagtggtcaatggcacctataaattcatgggccagaccctgtcgatcaatgcc
ggtgaagttcagtttattggccctatggccgtgccgaacctgaatattgaagcgacacgg
gagatcaaagaagatgatgttatcgcgggcgtacgcattactggcacaccggcgaaacca
gtggtctccctcttctcaaatcccgccaaagagcaggctgaaatcctttcttacatcatc
aagggtactgggcttaataactcagattcagatcaaaacaatgccttgatgatgggcgcc
gccctgaccctaggcaatcagctcggcgataatgccttctccaatatgagcagctccgca
agtggtgtgatagaaaagctggggatctctaacgttcaactcgatgccaacgatgacggt
aaagttgccataagcggctatattggcgatgaccttatggtcaaatacggcgtgggcgta
ttcaacccaggttatgagatgacagtacgctactacctgatgtctcaactctatctggaa
agcgtctcaggcaccatctctaagactttagatatctactacagcttcgatatcgattaa
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