Shewanella psychrotolerans: K0I62_11320
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Entry
K0I62_11320 CDS
T09306
Symbol
fadR
Name
(GenBank) fatty acid metabolism transcriptional regulator FadR
KO
K03603
GntR family transcriptional regulator, negative regulator for fad regulon and positive regulator of fabA
Organism
spsj
Shewanella psychrotolerans
Brite
KEGG Orthology (KO) [BR:
spsj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spsj03000
]
K0I62_11320 (fadR)
Transcription factors [BR:
spsj03000
]
Prokaryotic type
Helix-turn-helix
GntR family
K0I62_11320 (fadR)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FadR_C
GntR
HTH_Crp_2
TrmB
FCD
HTH_IclR
HTH_24
Fe_dep_repress
PaaX
MarR_2
Rrf2
HVO_A0261_N
LexA_DNA_bind
MarR
Motif
Other DBs
NCBI-ProteinID:
QYK00030
LinkDB
All DBs
Position
complement(2578587..2579345)
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AA seq
252 aa
AA seq
DB search
MTTVPQAPIKHKDKDIIEAKGPASFAEKYIVRSIWEGKFPPGSILPAERELSELIGVTRT
TLREVLQRLARDGWLTIQHGKPTRVNDIWETSGLNVLETIADLNPAGEPVLLEQLLSART
NISAIYFKGAVRYNPDKVLEALAPLVNLKDNAKAYIDFDYQLHHALAYHSGNPLYVLILN
GFKGLYSRVGEEYFSIEKARELALDFYQALEALAKEHNHHDVPVLMRSYGINSGKVWQRH
KSSLLQSAEANV
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgacaactgtcccccaagcaccaataaagcataaagacaaagatattattgaagcgaaa
ggccctgctagctttgccgagaaatatattgttcgttctatttgggaaggaaagttccct
cctgggtcaattttacctgccgaacgtgagctttctgagctcatcggggttactcgtacg
acgctgcgtgaagtgttacaacgattggctcgtgatggatggttaacgattcaacatggt
aaaccgactcgcgtaaacgatatatgggaaacgtcgggtctgaatgtgttagaaaccatt
gctgatttaaatcctgcgggagagcctgtcctgcttgaacagcttttgtcagcgagaacg
aatattagcgccatctattttaaaggtgcggttcgttacaatccagataaagttcttgaa
gcgttagcgccactggtgaacttaaaagataatgcaaaagcctacatagattttgattat
cagttacatcacgccttagcttaccattctggaaatccactttacgtgctaatccttaat
ggttttaaaggtctctatagccgagtgggtgaagagtacttttccattgagaaggcgagg
gagttagctctcgatttctatcaggcactagaagccttagcgaaagaacataaccaccat
gacgtaccagtattgatgcgcagttacggcattaatagcggtaaggtttggcagcgacat
aagagcagcctgctgcaatctgctgaggcaaacgtctaa
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