Shewanella psychrotolerans: K0I62_11375
Help
Entry
K0I62_11375 CDS
T09306
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
spsj
Shewanella psychrotolerans
Brite
KEGG Orthology (KO) [BR:
spsj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spsj03016
]
K0I62_11375 (rnd)
Enzymes [BR:
spsj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
K0I62_11375 (rnd)
Transfer RNA biogenesis [BR:
spsj03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
K0I62_11375 (rnd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
DNA_pol_A_exoN
Motif
Other DBs
NCBI-ProteinID:
QYK00041
LinkDB
All DBs
Position
complement(2588523..2589632)
Genome browser
AA seq
369 aa
AA seq
DB search
MLTFQYVDDDASLSSLVAQYSKASVLVLDTEFVRTRTYYARLGLIQVYDGKTLALIDPLA
VSDLSGFWALLQRDDIVSVLHSCSEDLEVLAKYGACQPKVLFDSQIAAALCGLGHGLGYA
KLVEHCLNVTLDKGESRTDWLKRPLTDAQLHYAANDVEYLYQLYPQLLEKLQTTGRLAWL
YEEGERMTQGRLDKPDGDNAYLKVKNSFQLTPKQLAYLKVLAKWRLEKALVKDLALGFVI
KDHALIALAKKQPQSTSDIFKMSELTEQEKRVHAKAIIAVMATADLDNLPEAIDVIALKP
GYKSAFKTIKNCLAEIAEAHNVPMELIGSKRHIHEFLHWQWAGRVGELPLLLNGWRATLS
EEKLRQLEI
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
ttgttgacgtttcaatatgtagatgatgatgccagtttaagctcgcttgtcgcccagtat
agcaaagccagtgtgctggtattggataccgaatttgttcgcacacgaacctattatgca
cgattagggctgatccaagtctatgatggtaaaacattagcattaatcgatccgttagcc
gtcagtgatctcagcggtttctgggcattactgcagcgtgatgacatcgtgtctgtgctt
cactcctgtagcgaagatttagaagtgttagcgaaatatggcgcttgccagccgaaagtc
ttgtttgatagtcaaatagcggccgcgttgtgtggattaggacacggattaggttacgcc
aaattagttgaacactgtttgaacgttaccttagataaaggtgaatctcgtaccgattgg
ctcaaacggccattaaccgatgcgcagctgcattacgccgctaatgatgtcgaatatctt
tatcagctttaccctcaattattagagaaactgcaaacaacaggccgattagcttggttg
tatgaagagggtgagcggatgacacaagggcgtctcgataagcccgatggtgataatgcg
tatcttaaggtgaagaacagttttcagctcactcctaagcaattagcctatttaaaagta
ttagccaagtggcgattagaaaaagcgttagtgaaagatttagccttaggttttgtgata
aaagatcatgcgttgattgcattagctaaaaagcagccgcagagcacaagcgatattttc
aaaatgagtgaacttaccgagcaggaaaaacgagttcatgccaaagccattatcgccgtg
atggcaacggccgatcttgacaatttgcctgaagctatcgatgtcattgcacttaagcct
ggttataaatcggcatttaagacgattaaaaattgccttgccgagatcgctgaagctcat
aatgtacctatggagcttatcggatcaaaacgtcacatacatgagtttttacactggcaa
tgggcgggaagagtaggtgaactgcctttgttacttaatggttggcgcgcaaccttgagc
gaagagaagcttagacaacttgagatatga
DBGET
integrated database retrieval system
