Shewanella psychrotolerans: K0I62_11380
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Entry
K0I62_11380 CDS
T09306
Symbol
fadD
Name
(GenBank) long-chain-fatty-acid--CoA ligase FadD
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
spsj
Shewanella psychrotolerans
Pathway
spsj00061
Fatty acid biosynthesis
spsj00071
Fatty acid degradation
spsj01100
Metabolic pathways
spsj01212
Fatty acid metabolism
spsj02024
Quorum sensing
spsj04146
Peroxisome
Module
spsj_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
spsj00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
K0I62_11380 (fadD)
00071 Fatty acid degradation
K0I62_11380 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
K0I62_11380 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
K0I62_11380 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
spsj01004
]
K0I62_11380 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spsj04147
]
K0I62_11380 (fadD)
Enzymes [BR:
spsj01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
K0I62_11380 (fadD)
Lipid biosynthesis proteins [BR:
spsj01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
K0I62_11380 (fadD)
Exosome [BR:
spsj04147
]
Exosomal proteins
Exosomal proteins of breast milk
K0I62_11380 (fadD)
Exosomal proteins of breast cancer cells
K0I62_11380 (fadD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
QYK00042
LinkDB
All DBs
Position
complement(2589723..2591396)
Genome browser
AA seq
557 aa
AA seq
DB search
MEQLWTKNLPDDVPAVIDEKLYSSLIDLFERSVTKYADQPAFVNMGATLTYRKLEERSRA
FAAYLQNELKLEKGDRVAIMMPNLLQYPIALFGILRAGMVVVNVNPLYTPRELKHQLNDS
GAKAIVVVSNFANTLEQVVDQTPVESVILTGLGDLLSAPKRTLVNFVVKYIKKMVPKYHL
PHAIGMRKSLSKGRRLQYVKPTVKSDDIAFLQYTGGTTGVSKGAMLTHNNIVSNLLQADA
SYSPLLENGKEFVVTALPLYHIFALTVNCLLFLHKGANNLLITNPRDIPAFVSELKKHPF
TALTGVNTLFNALVNSTDFQALDFSNLKLSIGGGMAVQRAVADKWQGITKTKLLEGYGLT
EASPLVACCPYNLDGYNGSIGFPVANTDMQVRDDDGNVLAQGETGELFAKGPQIMKGYWQ
RPEETASIIDEQGYLATGDIGYMDDKGFFFIVDRKKDMILVSGFNVFPNEVEEVVALHSK
VVEVAAVGVPHKVSGELVKIFVVASDKSLTEEQLIKHCRDHLTGYKIPKLVEFRDELPKT
NVGKILRRELRDEAKSA
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
gtggaacagctttggacgaagaacctacccgatgatgtacccgctgttattgacgagaag
ttatatagttcgcttattgatctatttgaacgctcggtaacgaaatatgctgatcaacct
gcgtttgtgaatatgggcgccacgttgacttatcgtaagcttgaagagcgcagccgtgcc
tttgccgcttatcttcaaaacgaactaaagttagaaaagggcgatcgtgtcgcgattatg
atgcctaaccttttacaatatcccattgcattgtttggtattttgcgtgcgggcatggtg
gttgtaaacgtcaatccactttataccccaagagagttaaagcaccaactgaatgactca
ggtgcaaaagcgattgttgtggtctctaattttgctaacacgcttgagcaagtggttgac
caaacgcctgttgagagcgtgatcttaactgggctcggggatcttcttagtgcgcctaag
cgtaccttagtgaattttgtcgtaaaatatattaagaagatggtgcctaaatatcatctt
cctcatgccatcggaatgcgtaaatcgctatcgaaggggcgccgactgcaatatgtaaaa
cctactgtgaaatccgatgatattgcgttcttgcaatatacaggtggaactactggggtc
tctaaaggtgcgatgttgacccataacaatattgtcagtaatttgctgcaggcagatgcg
tcatattcgccattgctggaaaatggaaaagagtttgtcgttaccgcgttaccgctgtat
cacatctttgcattaaccgtgaattgtttactatttttgcataaaggggctaacaacctg
ctgatcaccaacccaagagatattccggcgtttgtgtcagagctgaaaaaacacccattc
accgcgttaactggtgttaataccctgtttaatgcactcgtgaactcgactgattttcaa
gcgttggatttttctaaccttaagctatcgattggggggggcatggcggtgcaacgtgcc
gtcgccgataaatggcaagggatcactaagacaaagttattagaaggttacggtctgacc
gaggcttctccgctggtggcttgctgtccttataaccttgatggttataacggctctatt
ggcttcccagttgcaaatactgatatgcaagtcagagatgatgacggtaatgttttagcc
caaggtgagacgggggagctttttgctaaaggcccacagatcatgaagggctactggcaa
cgccccgaagaaaccgcctcaattatcgacgaacagggctatctcgctacgggcgatatc
ggctatatggatgataagggcttcttctttatcgtcgatagaaagaaagatatgattttg
gtgtcgggctttaacgtcttccctaatgaggttgaagaggttgttgcgcttcattctaag
gtcgttgaagttgctgccgttggcgttccccataaagtgagtggcgaattggtgaagatt
tttgtggttgcttctgataaatctttaaccgaagagcaactaattaagcattgtcgtgat
catttgacgggatataaaattcctaagctggtagaatttagggatgagttacctaagaca
aacgtcggtaagattttacgacgtgagttacgcgacgaggccaagtctgcgtga
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