Shewanella psychrotolerans: K0I62_11855
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Entry
K0I62_11855 CDS
T09306
Symbol
rluC
Name
(GenBank) 23S rRNA pseudouridine(955/2504/2580) synthase RluC
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
spsj
Shewanella psychrotolerans
Brite
KEGG Orthology (KO) [BR:
spsj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spsj03009
]
K0I62_11855 (rluC)
Enzymes [BR:
spsj01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
K0I62_11855 (rluC)
Ribosome biogenesis [BR:
spsj03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
K0I62_11855 (rluC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
RluD_N
TGS
FHA
Motif
Other DBs
NCBI-ProteinID:
QYK00132
LinkDB
All DBs
Position
complement(2705194..2706153)
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AA seq
319 aa
AA seq
DB search
MNNQQSLNKVELVTIDEDHLGQRIDNFLVTKLKGVPKSMIYRIVRKGEVRVNKKRIKPEY
KLQDGDIVRIPPVRVSASDDKPGPSAKLTKVSQLEDRIVFEDKSIIVLNKPAGIAVHGGS
GVDFGVIEAMRSLRPQQKFLELVHRLDKDTSGVLLIAKKRSALKHLHDQLRYKKMQKDYF
ALVRGEWQSHDKVINAPLLKLTLKSGERIVRVNQEGKASETRFKIKQRYKGVTLVQASPV
TGRTHQIRVHCQYAGHPIACDEKYSEQKFDDSMRALGLNRLFLHAAQLKFIHPSTEEVMQ
VKAPLDDALELLLSKLEKV
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgaataatcaacaatctctaaataaagtcgaattggtcaccattgatgaggaccattta
ggccagcgaatcgataactttcttgtcaccaaattaaaaggcgtacctaaaagcatgatc
tatcgtatcgtgcgaaagggggaagttagggtcaataaaaaacgaatcaagccagaatat
aagctacaggatggcgacatcgttcgcattccgcctgtcagagtttctgctagtgacgat
aagcctgggccgagtgctaaattgaccaaggtgtctcaattagaagaccgtatcgtattt
gaagataagtccattatcgtgctcaacaagcccgcgggtatcgcggtacatggcggcagc
ggtgtcgactttggggtgatcgaagcgatgcgatcattacgtcctcagcagaagtttctc
gaattagtgcaccgtttagataaagacacatctggtgtgttgcttatcgcaaagaagcgc
agcgcattaaaacatctgcatgatcagttgcgttataagaagatgcagaaagattatttt
gcattagttcgtggtgagtggcaaagccatgacaaggtgatcaatgcaccattattaaag
ttaacgcttaagtccggtgagcgtattgttagagttaatcaagagggcaaagcatctgaa
acgcgctttaagattaaacagcgatataaaggtgtcactttagtgcaagctagcccagtg
acaggacgaactcatcagatccgtgtgcattgccaatatgctggccaccctattgcctgt
gatgaaaagtatagcgaacagaagtttgatgattcgatgcgagcgttaggcttaaaccgc
ctatttttacatgcagcgcagctaaagtttatccatcctagcaccgaagaggtgatgcaa
gttaaagcgccattggatgatgcgttagaactattattgtctaaattggaaaaagtatga
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