Shewanella psychrotolerans: K0I62_12570
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Entry
K0I62_12570 CDS
T09306
Name
(GenBank) TRAP transporter large permease subunit
KO
K11690
TRAP-type transport system large permease protein
Organism
spsj
Shewanella psychrotolerans
Pathway
spsj02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
spsj00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
K0I62_12570
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spsj02000
]
K0I62_12570
Transporters [BR:
spsj02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
K0I62_12570
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DctM
Motif
Other DBs
NCBI-ProteinID:
QYK00241
LinkDB
All DBs
Position
2839210..2840607
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AA seq
465 aa
AA seq
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MTIATLFISLFLCMLIGMPIAIALGFSSMLTILLYSDDSLASIALKLYESTSEHYTLLAI
PFFILSSAFLSTGGVARRIIDFAMDSVGHIRGGLAMASVMACMLFAAVSGSSPATVAAIG
SIVIVGMVRAGYPEKFAAGVITTSGTLGILIPPSIVMLVYAAATEVSAARMFMAGLIPGL
MMGLLLMLAIYIVARIKKLPSRPFPGVKVLAISSAKAMGGLALIFIVLGSIYGGVASPTE
AAAVACVYAYFIAVFGYRDIGPLKDVAWRKDQEPILSASIRNIGYMLLAFVKTPTDKEIR
HVVRDGAKVSIMLLFIIANAMLFAHVLTTERIPHIIAETIVGMGLPVWGFLIIVNLLLLA
AGNFMEPSAILLIMAPILFPIATQLGIDPIHLGIIMVVNMEIGMLTPPVGLNLFVTAGIT
GRSMGWVIQSCLPWLLLLLFFLVLITYIPQISLFLPEYIDKLNGY
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgaccattgcgacactatttattagccttttcctctgcatgctcatcggcatgccaatt
gctatcgcgcttggcttttcaagcatgttgaccatcctactctattcggatgactcgcta
gcttctatcgcgctaaagctgtatgagtcgacatcggaacattacaccttattagcgatc
cccttcttcattctgtcgtcagccttcttatcgacaggcggcgtagcaagacggatcatc
gactttgccatggacagcgtaggccatattcgtggtgggcttgctatggcctctgtcatg
gcttgtatgctatttgcagcggtatcgggctcatcccctgccacagtagcagccatcggt
tccattgttatcgtgggaatggtacgcgcaggatatccggagaagtttgctgcgggcgta
ataacaacatctggcacattagggatcttaattcccccttctattgtgatgttagtctac
gctgctgcaacggaagtctcggctgccagaatgtttatggcagggcttattccaggttta
atgatggggcttttgttaatgctggctatttacattgttgcacgcattaagaaactcccg
tctcgcccctttcctggtgtaaaagtcctcgccatctctagcgctaaagctatgggtggt
ctggcgcttatcttcatcgtgttaggatcgatttacggtggtgtagcaagcccaacagaa
gccgcagccgttgcctgtgtctacgcctatttcatcgcagtatttggttatcgagatatt
ggcccgctaaaagacgtagcatggcgtaaagatcaagagccaatattgagcgcgagcata
agaaatattggctatatgctactggcattcgtaaaaacgccgactgataaagagatccgc
catgtcgttagggatggcgcaaaagtcagtattatgctgctgtttatcatcgccaatgcg
atgctatttgctcatgtactgaccactgagcgtattcctcatatcattgcagaaacgatt
gttggtatgggccttcccgtgtggggattcctgatcatagtcaatttgctcctgcttgct
gcaggtaattttatggagccttcagctattttactgattatggcacccatattattccct
atcgcaacacaactaggtattgaccctattcatttggggatcatcatggtagttaacatg
gaaatcgggatgcttacgcccccggtgggtttgaacctctttgtcacagcggggataaca
ggacgcagtatgggttgggtgatccaatcatgtttgccgtggttattgttgctgctgttt
ttcttggtactcatcacttacattccacagatatctctgtttttgccagaatacatcgat
aagttaaatggatactaa
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