KEGG   Shewanella psychrotolerans: K0I62_12580
Entry
K0I62_12580       CDS       T09306                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
spsj  Shewanella psychrotolerans
Pathway
spsj02020  Two-component system
Brite
KEGG Orthology (KO) [BR:spsj00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    K0I62_12580
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:spsj02022]
    K0I62_12580
Two-component system [BR:spsj02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   K0I62_12580
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 AAA_5 HTH_8 AAA_2 Mg_chelatase AAA_16 AAA_3 AAA HTH_50 AAA_7 ATPase
Other DBs
NCBI-ProteinID: QYK00243
LinkDB
Position
2842529..2843896
AA seq 455 aa
MLNLENSHCDIIIVDDEPLIGSALVQLFELESYCAISITDPRLLTNGLPENWPGIIISDV
NMPDIDGLKLMRILQSQDKDIPVILLTGHGDIAMAVQALKQGAYDFIEKPFNNEHMLDIA
KRALEKRSLTLENRSLKRELESQSTPGPRILGHSAGIKQMRHIIHQVIDMPADVLIEGET
GTGKELVARYLHDHSPRSEANFVAINCGAIPETIIESELFGAESGAFTGADKTRIGKFEY
ANGGTLFLDEIESTPMSLQVKLLRVLEDRKVERLGSNKSIELDIRIIAATKVDLKSLCDT
GEFRQDLLYRLNLVTVPIPALRERREDIGLLFLHFARVASARYHKALIPLSTEHTAQLVS
HDWPGNVRELRNLAERYVLLGADAAFATSMGQNNQLNTNMSLQQRVEFFERLLIEEALSV
NKGSIKLTMEQLELPRKTLYDKMQKFGLNRKTFIQ
NT seq 1368 nt   +upstreamnt  +downstreamnt
atgctaaatctagaaaatagccactgcgacattattattgtcgatgatgaacccttaatt
ggctccgcgctggtgcagctgtttgagttggagtcttattgtgcgatatcaataacagat
cccagattgctaaccaatggactgccagaaaactggccagggatcataatatccgatgtt
aacatgcccgatatcgacggcttaaagctaatgcgcatcttacaatcccaagacaaagat
atccccgtcatattattaacgggccatggtgatatcgccatggcggttcaagcgcttaaa
caaggtgcctatgactttattgaaaagccattcaataacgaacatatgctcgatattgct
aaacgcgcgttagaaaaacgtagtctcactctagaaaaccgcagccttaagcgtgaactt
gaatcacaaagcacacctgggccacgcatattgggccacagtgctggcataaagcagatg
cggcatatcatacatcaagtgatcgatatgcctgcggatgttttgattgagggcgaaacc
ggtacaggtaaagaactggtagctcgctatcttcatgatcacagccctcgaagtgaagcc
aattttgtggccattaactgcggtgcgatccctgagaccattatcgaaagcgaacttttt
ggtgcagaatcaggggcgtttaccggtgccgacaaaactcgtataggtaaatttgaatat
gcgaatggcggcacgctatttctcgatgagattgagagcacccccatgtcgcttcaggtg
aaattactgcgcgtgttagaagacagaaaagtggagcgtttaggctccaataaaagtatt
gaactcgatatccgcattattgccgccactaaggtcgacctaaaatcactgtgtgatact
ggtgagttccgccaagacctactctatcgcctaaatctcgttactgtgccaattccagca
ctacgagaacgacgcgaagatattggcctactctttttgcatttcgctcgtgtggcttca
gcccgttatcacaaggcattgatcccattaagtaccgagcatactgctcagcttgtatct
catgattggcctggtaacgttagagagttaagaaacctagccgaacgttatgtcctgctt
ggcgccgacgccgcctttgccacatcaatgggtcaaaacaaccaacttaatactaatatg
tcactgcagcaacgagtggaattttttgaacgcttactgatagaggaagccctaagcgtg
aataaaggcagtatcaagctcaccatggagcaactcgaactgcccagaaaaaccttatat
gacaagatgcagaagtttggcttaaaccgaaaaacgtttatccaataa

DBGET integrated database retrieval system