Shewanella psychrotolerans: K0I62_13350
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Entry
K0I62_13350 CDS
T09306
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
spsj
Shewanella psychrotolerans
Pathway
spsj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
spsj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
K0I62_13350 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spsj03400
]
K0I62_13350 (xseA)
Enzymes [BR:
spsj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
K0I62_13350 (xseA)
DNA repair and recombination proteins [BR:
spsj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
K0I62_13350 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Myb_DNA-bind_4
Motif
Other DBs
NCBI-ProteinID:
QYK00382
LinkDB
All DBs
Position
3009306..3010634
Genome browser
AA seq
442 aa
AA seq
DB search
MNMPKNNVYTVSRLNGEVRQLLEGELGRIWLEAEISNFSAPSSGHWYLTLKDNYAQIRSA
MFKGKNRSVTFRPANGQQVLVKGSISVYEPRGDYQLIIDSMLPAGDGLLAQQYEALKMKL
AAEGLFAADTKRPLPHNIQRIGVITSATGAAIRDVLQVLKRRDPSIEVIIYPAPVQGEHA
DRAICHAIMQANDRNEVDVLLVTRGGGSLEDLWCFNSEALAHTIYNSALPIVSAVGHEVD
TTISDYVADLRAPTPSAAAELLSQDALSKSDKLIMAITRLKQGWQHYRLKQQQRFSMIEH
RLHRQDPKRQLQQYEQRFDEMQLRLESAINARLAKLNMSSQGLAHRLAQQSPSNRLRLEQ
SRLSFLNQKLNKAMQTRLSDANTALTHAAHQLDTVSPLATLSRGYSITLDANERVVQKVA
DVNAGDRLTTKLIDGEVQSTVL
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgaatatgccgaaaaataatgtttacaccgtatcccgtctcaatggagaggtcagacaa
cttctcgaaggcgaactgggtcggatctggctagaagctgagatctccaatttttcggcg
cccagttctggccactggtatttaaccttaaaagataactacgcccagatccgctcggcc
atgttcaaaggtaaaaatcgcagcgtgacttttagaccagccaatggacagcaggtctta
gttaaaggctctattagcgtatacgagcctagaggcgactatcaacttatcatcgactcc
atgttacctgcaggtgatggcttattagcgcagcaatatgaagccttaaaaatgaaactg
gccgctgaaggcctatttgcagcagacactaagcgaccactgccccataatattcaacgc
atcggtgttattacctcagcaacaggtgctgcaataagagatgtactacaggtactcaaa
cgccgcgatccctctattgaggtcataatctatcccgcccccgtccaaggcgaacatgca
gatagagcaatatgtcacgccattatgcaagccaacgatcgcaatgaggtcgacgtgttg
ctggttacccgcggcggcggttcattagaagacttatggtgctttaacagtgaagcgctg
gcccatacaatttacaacagtgcgcttcccattgtctcagcggtcggtcatgaggtcgac
accaccattagcgactacgttgccgatcttcgtgccccgacgccgtcagcagcggctgag
ttgctgtcacaagatgccctaagcaaaagcgataagctcattatggcgatcacccgctta
aaacaaggttggcaacattaccgcctaaagcagcagcaacgctttagcatgatcgagcat
cgtttacataggcaagatcccaaacgccagttacaacagtatgagcagcgcttcgatgag
atgcagctcagactcgaatcggcgatcaatgccagactggcaaaattgaatatgagcagc
caagggttagcccaccgattagcacagcaatcccctagcaaccgcttaaggctggaacag
agtcgattaagttttttaaaccaaaagcttaataaagcaatgcaaactagattatctgat
gcaaacaccgcattaactcacgccgcccaccagttagacaccgtcagtccactcgcaaca
ctaagccgtggctacagcattaccttagatgcaaatgaaagggtcgtacaaaaagtggcc
gatgttaacgcaggcgacaggctaaccactaagctcatcgatggtgaagtgcaatctacc
gtattgtga
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