Shewanella psychrotolerans: K0I62_13380
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Entry
K0I62_13380 CDS
T09306
Name
(GenBank) pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
spsj
Shewanella psychrotolerans
Brite
KEGG Orthology (KO) [BR:
spsj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spsj03009
]
K0I62_13380
Enzymes [BR:
spsj01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
K0I62_13380
Ribosome biogenesis [BR:
spsj03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
K0I62_13380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
QYK00388
LinkDB
All DBs
Position
complement(3016611..3017354)
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AA seq
247 aa
AA seq
DB search
MRLDKFVCKSTTLNRQQAVLVISAGEVTVNGNAIVDAAVQVHESNCIEFQGERLLPRPFR
YILLNKPKSTLCSNVDGDYPSIFNLLNVPNPDELHIAGRLDADTTGLVLITDDGRWSFNV
FNPKYHCQKVYRVRLRDSIEGEHKGEIDGQLVARFKQGLQLPGETKLTLPAKLVYVSERE
ALLTISEGRYHQVKRMFAAVGNRVVGLHRERVGSIECDVACGEWRYLSDIEVEGFGFSSL
SELDNRR
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgcggttagacaaatttgtgtgcaagagtacaacccttaatcgccaacaagcagtattg
gttatctctgctggtgaagtcacggtgaatggcaatgcgattgttgatgcggccgtgcag
gtacacgaaagtaattgcattgagtttcaaggtgagcgcctgttgccgcgtccttttcgt
tatatattgttaaataagcctaaaagcaccctatgttctaatgtcgatggggattacccc
tccatctttaatttactcaatgtgccgaatcctgatgaactgcatattgcgggcaggttg
gacgcggataccaccgggctggtactcatcaccgatgatggccgctggtcgtttaatgtg
tttaatcccaaatatcattgccaaaaagtgtatagggtaaggctgagagatagcatagaa
ggtgaacacaaaggcgagattgatgggcaattggtggctaggtttaaacaggggttacag
ttacccggtgagacaaaactaacgttgccagccaaactggtctatgtcagtgagcgcgag
gcgttactgactattagtgaggggcgttaccatcaggtcaagcgcatgtttgctgcggtg
ggcaatcgtgttgttggcctgcatcgtgagcgggttggcagtattgaatgtgatgtcgcc
tgtggtgaatggcgatatttaagtgatattgaggttgagggtttcggcttttcttcgtta
agtgagttagataacaggcgctag
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