Shewanella psychrotolerans: K0I62_13555
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Entry
K0I62_13555 CDS
T09306
Name
(GenBank) RsmB/NOP family class I SAM-dependent RNA methyltransferase
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
spsj
Shewanella psychrotolerans
Brite
KEGG Orthology (KO) [BR:
spsj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spsj03009
]
K0I62_13555
Enzymes [BR:
spsj01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
K0I62_13555
Ribosome biogenesis [BR:
spsj03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
K0I62_13555
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltransf_31
Methyltransf_25
Ubie_methyltran
RsmF-B_ferredox
Methyltransf_11
DPC4_N
Motif
Other DBs
NCBI-ProteinID:
QYK00420
LinkDB
All DBs
Position
3053557..3054960
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AA seq
467 aa
AA seq
DB search
MVDTSASPLTSAATDKASNVSITETIHQDVNADTSPHKRALSYSITIHQLFEQVMQSKMP
ADRVVAEYFRTHKKHGSKDRRVIRESLFGLFRWHGWLKQLPQVCNAPQAWFASLVLTAKI
EDHPWQDIRDAWFSFAALTELEHINNTNDISSLVLKLKMMQNCFSELAIAITDLVPNWFW
AHYPDSTPQEQHALIESLCSRPPIWGRLQGIDGNKAIAALSDSDIPASMSAYFSDAINLG
HKSINLNGLTLYTEGQLEIQDLGSQVIGNICMPKDDQLWWDTCSGAGGKTLQLRSLMLQQ
NPHSKGSIVASDIRRKPLEELNKRAKRAGFTQIRVSPWQSDALPVPSEHFDGVLVDAPCS
CTGTWRRNPDMRWLDDETAITDKPALQLDILSRASAAVKSGGVLVYATCSLSPSENEAVV
ESFLATHGEFTLQALTHPFTGDVSSMLTVLPYQADSDGMFVAKMVKG
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggtcgatacttcagcttctccattaacctcagcagcgacagataaggcatcgaacgtg
tcgataactgaaaccatccatcaagatgtaaatgctgatacatccccccataaacgcgca
ttgagttacagcatcactattcatcaactatttgaacaagtgatgcagagtaagatgccc
gcggatcgcgtagtcgcagagtattttcgtacccataaaaaacatggttcaaaagacaga
cgcgtcattagagaaagtttgtttgggctattccgctggcacgggtggctgaaacaactg
cctcaagtgtgtaatgcacctcaagcctggtttgcttcattagtgttaacggcaaaaatc
gaagatcatccatggcaagatattcgtgatgcctggtttagttttgcggcattaactgaa
cttgaacacattaataacacaaatgatattagtagcttagttctcaagcttaagatgatg
caaaactgctttagtgagcttgctattgccattaccgatttggtgcctaactggttctgg
gcgcactatcctgactcgacaccacaagagcaacatgcccttatcgaatccctatgctct
cgtccaccgatatggggacgcctacaaggaatagatggcaacaaggctatcgcggcatta
agcgatagcgacatcccagcatcgatgagcgcctactttagtgatgccattaatcttggc
cataagagcattaaccttaatggattaacactctataccgaaggccaactggagatccaa
gatctcggttctcaggtaataggtaatatctgtatgccaaaagatgatcagctatggtgg
gatacttgcagcggtgcgggcggaaaaacgctgcagctgcgctccttgatgttacagcaa
aaccctcacagcaaaggcagtatagtggcctctgatattcgtcgtaagccactagaagag
ctgaataaacgagctaagcgggcaggctttacacagatacgcgtatcaccttggcaatcg
gacgcccttcccgtgccaagcgaacatttcgatggagtattagttgatgcgccctgcagt
tgcactggcacgtggcgacgcaatcccgatatgcgctggctcgatgatgaaaccgcgatt
accgacaaaccggcactgcagctcgatatcttaagccgcgcatctgccgcggtaaaatcg
ggcggcgtattggtatatgccacctgttcattgagtcctagtgaaaatgaagcggttgtt
gagtcctttttagccactcacggtgaatttaccctacaagcattaacccacccatttaca
ggtgatgtttcatcaatgctaacggtccttccctatcaggccgatagcgacggcatgttt
gtcgccaaaatggtaaagggttaa
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