Shewanella psychrotolerans: K0I62_13680
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Entry
K0I62_13680 CDS
T09306
Symbol
thiI
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
spsj
Shewanella psychrotolerans
Pathway
spsj00730
Thiamine metabolism
spsj01100
Metabolic pathways
spsj01240
Biosynthesis of cofactors
spsj04122
Sulfur relay system
Module
spsj_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
spsj00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
K0I62_13680 (thiI)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
K0I62_13680 (thiI)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spsj03016
]
K0I62_13680 (thiI)
Enzymes [BR:
spsj01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
K0I62_13680 (thiI)
Transfer RNA biogenesis [BR:
spsj03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
K0I62_13680 (thiI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
ThiI_fer
Rhodanese
Motif
Other DBs
NCBI-ProteinID:
QYK00444
LinkDB
All DBs
Position
complement(3085296..3086750)
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AA seq
484 aa
AA seq
DB search
MKFIVKLFPEIMMKSKPVRMRFTKMLETNIRNVLRKVDDDAKVQRQWDKIMVKVPADKPE
MVAIYAERLACIPGIAHVLQVKESTFESIDDIYQQTLPIYKDLLAGKTFCVRVKRSGKHD
FNSIEVERYVGGGLNQFTDAAGVRLKNPDMTVNIEIDRENLYLVEKRIDGLGGFPMATQE
DVLSLISGGFDSGVSSYQFIKRGSRTHYCFFNLGGDQHEIGVKQVAYHLWQKYGESHKVK
FISVPFDPVVTEILEKIDNGQMGVILKRMMMRAATRVADKMGIQALVTGEAMGQVSSQTL
TNLNVIDRCTEMLILRPLIVMDKQDIINISRQIGTEDFAKSIPEYCGVISQKPTVKAVLS
KIEAEEAKFSEDLLDRVIEAAEIIDIREIATSMDTKITETETVDTISGGEVVVDIRAPEE
EEQSPLAIDGVEIKAIPFFKLATKFADLDKDKTYLLYCDRGVMSKLQALYLQEQGYNNVK
VYRP
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttatcgtaaaactgtttcctgaaatcatgatgaaaagcaaaccggtaagaatg
cgctttaccaagatgcttgaaactaatattcgtaatgtgcttcgaaaagtcgacgacgat
gcaaaagtgcagcgtcagtgggacaaaatcatggtcaaggtgcctgccgataagcctgaa
atggttgctatttatgcggaacgtttagcatgtattccagggatcgcccatgtactgcaa
gtcaaagagagtacttttgaatcgattgatgatatttatcaacagacgttaccaatttat
aaagatctccttgcgggtaaaactttctgtgttcgagtaaaacgtagcggtaagcatgac
tttaactcaattgaggtggaacgttatgttggtggtggattgaatcaatttaccgatgct
gcaggcgttagacttaaaaaccctgatatgacggttaatatagaaatcgatagagagaat
ctctatttggttgaaaagcggattgacgggcttggtggcttccctatggccacgcaggaa
gatgtattgtcattgatttcaggtggattcgactcaggtgtatcgagctaccagtttatt
aagcgtggctctcgaactcattactgcttctttaatcttggtggtgatcaacatgagata
ggtgttaagcaggttgcttatcatttatggcaaaaatatggtgagtcgcataaggttaag
tttatttctgttcccttcgatcctgtggtcaccgaaatcctagaaaaaatcgataacggc
caaatgggcgtcatattaaaacgtatgatgatgcgtgcggctacccgcgtcgccgataaa
atgggcattcaagcgttagtgactggtgaagcgatgggccaggtttctagccaaacattg
actaatctgaatgttattgaccgttgtaccgagatgttgattctgcgcccgctgatcgtg
atggacaaacaggatatcataaacattagtcgtcagatcggtaccgaagattttgcgaaa
tcgattcctgaatattgtggcgtgatttcacaaaagccaaccgtgaaagcggtactatct
aaaatcgaagccgaagaggctaagttctctgaagatctattagatagagttattgaagcg
gcagaaattatcgatataagagagattgcaacgagcatggatactaaaatcactgaaact
gagacagtcgatacgattagtggcggcgaagttgttgttgatatacgcgctccagaagag
gaagagcaaagtcctctggctatcgatggggtggagattaaagcgattcctttctttaag
cttgcgactaaatttgcagatttagataaagataagacttacctgctttattgcgataga
ggcgtgatgagtaagcttcaagcgctatatctacaagaacaagggtataacaacgttaaa
gtgtatcgtccttaa
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