Shewanella psychrotolerans: K0I62_13855
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Entry
K0I62_13855 CDS
T09306
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
spsj
Shewanella psychrotolerans
Brite
KEGG Orthology (KO) [BR:
spsj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spsj03400
]
K0I62_13855 (radA)
DNA repair and recombination proteins [BR:
spsj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
K0I62_13855 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
AAA_22
Lon_C
SLFN-g3_helicase
GvpD_P-loop
nSTAND3
AAA_18
Rad51
AAA_19
CobU
AAA_14
RecA
MMR_HSR1
NPHP3_N
AAA_30
DUF7125
AAA
cobW
AAA_16
AAA_11
ABC_tran
Zeta_toxin
AAA_23
Thymidylate_kin
AAA_28
Motif
Other DBs
NCBI-ProteinID:
QYK00478
LinkDB
All DBs
Position
complement(3128414..3129787)
Genome browser
AA seq
457 aa
AA seq
DB search
MAKNKTAYVCNECGQDFPRWQGQCSACNEWNTITEVRLGSVKSSSASVAGYAGSVGGGSK
KLSEVEEFEAKKMLTGIGELDRVLCGGLTTGSVNIISGDPGAGKTTILSDLVARMSQVMP
SLYCTAEESLSQFKNRVNRLKLDCNEDNLYLMAETSVEAIIAELEAKQVKFAVIDSIQAV
VTELANGSPGSPSQVKSSAQALTQYCKQNNVTMFLVAHVNKNNETAGPQTLIHIVDCLTH
LECNDGQVRTLRANKNRFGDVDTVGIFKMTERGMISVDNPSEIFLSGSTTDSPGAAITCI
RKGNRNLLLEIQCLTTETEGEFPQRVCVGLNMNRIKMLTGILRKHTRTKIFHDTYFNLVG
GLKIDESETCIDLALVTALLSSLNDFVVPRTTCIMGELSLNGDVRPIDSGVPRVKEAVQH
GFTEIFIPYRNYHKSMEGLGAKINPIKTIHELLELIS
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagaataaaacagcgtatgtatgtaatgagtgcggtcaagattttccgcgctgg
caagggcaatgcagtgcctgtaacgagtggaatactattaccgaagtccgtttaggatcg
gtgaaatcgagtagtgcttcggtggcgggttatgctggttctgtaggtggcggctcaaaa
aaactcagcgaagttgaggagtttgaagccaagaagatgctgaccgggatcggggagcta
gatcgggtgttgtgtggcgggctgaccacgggttcagtgaatattatttctggtgatcca
ggtgccggtaaaacgaccattttgtctgatctggtggcgcgtatgtcgcaggttatgcca
tcgctttattgtactgccgaagagtcgctgtcacagtttaagaatcgagttaaccgactt
aagttagattgcaatgaggacaatttgtatcttatggccgagaccagtgtcgaggctatc
atcgcagaactagaagctaagcaagtcaaatttgcggtgattgattctattcaggcggtt
gtcaccgagctcgctaatggtagtcctggctcgccatcacaagtcaagagcagtgctcag
gcgttgactcagtattgtaagcaaaataatgtcactatgtttctcgtggctcatgtgaat
aagaacaatgaaactgctgggccgcagacacttatccatattgtcgattgtttaactcat
ttagagtgtaacgatggtcaagttcgtacactacgcgctaataaaaaccgttttggggat
gtcgataccgtcggtatttttaagatgacggagagagggatgatcagtgtcgataatccc
agtgagatctttctctctggttcgacgaccgactcaccgggcgccgcgatcacctgcatt
cgaaagggcaatcgtaacttactgctagagatccagtgtctaaccactgagaccgagggt
gagtttccacagcgggtttgtgtgggattgaatatgaatcgaatcaagatgctcactggt
attttacgtaaacacacacgtaccaagattttccatgacacctattttaatttagttggt
ggtctgaagattgatgagtccgagacctgtatcgatttggctttagtcaccgccttgctc
agcagtttaaatgatttcgttgtcccaagaaccacttgcatcatgggcgaattgagttta
aacggtgatgtgcgtcccattgatagtggcgtaccgcgggtgaaagaggcggtgcagcac
ggctttactgagatttttataccctatcgtaactatcataaatcgatggaggggcttggg
gcgaagatcaaccctatcaagacgattcatgaactgctggaattaatcagttag
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