Shewanella psychrotolerans: K0I62_14595
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Entry
K0I62_14595 CDS
T09306
Name
(GenBank) OmpA family protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
spsj
Shewanella psychrotolerans
Brite
KEGG Orthology (KO) [BR:
spsj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spsj02000
]
K0I62_14595
Transporters [BR:
spsj02000
]
Other transporters
Pores ion channels [TC:
1
]
K0I62_14595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA_membrane
OmpA
OMP_b-brl
Phenol_MetA_deg
Porin_4
DUF748
Opacity
OprF
DUF2490
Motif
Other DBs
NCBI-ProteinID:
QYK00611
LinkDB
All DBs
Position
3295723..3296826
Genome browser
AA seq
367 aa
AA seq
DB search
MMNNTFKAILLTSMLPFAANAAQELSPWYVGGGLGINNYEPNCDQKTMKVCGEDDPYAWD
VFGGYLFNDYFGVELGYRDLGRAQWIDYSDKLNDVGAHGMTLGLVGFWPFADKWSLSAEA
GAMNYLLSNNKQWGSEYYSDRGVAPYVGAGIGYNFTENLKLQAKYRRYENLDEDKWNTLE
MESNYWGLELSYRFGRTAPAAVVAPVAVAPKDSDNDGVTDDKDQCADTPSNHQVDSSGCT
IYKEVTEKRDVGSILFANNSSVVKKESYERIEKLANYMNQHPRSTVAISGHASNVGNPEY
NMDLSERRAAAVAEILVNTYGISKDRVTSKGYGVTQPVIEGNSAEANKANRRIEAYVTGI
HKEALIK
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgatgaacaacacattcaaagctattctgcttacgtcaatgcttccatttgcagctaat
gcggctcaagaactcagtccttggtatgtcggtggtggtttaggcataaataattatgaa
ccgaactgcgatcaaaaaaccatgaaggtttgtggcgaagatgatccttatgcatgggac
gttttcggtggttatctatttaacgactatttcggagttgagctcggttatcgtgatctt
ggccgcgcacagtggattgactactctgacaagcttaatgacgtcggcgcacacggcatg
acgttaggtctagtcggtttttggccatttgctgacaagtggagtctatctgcagaagct
ggtgcaatgaactatctgctatcgaataacaagcagtggggcagcgaatactacagtgat
cgcggtgtagcaccatatgttggtgctggtatcggttataacttcacagaaaacctaaag
ctacaagctaagtatcgccgttatgagaacttagatgaagacaagtggaacactcttgaa
atggagagtaactactggggtcttgaacttagctaccgctttggtcgtacagcgcctgcc
gctgttgtagctccagtcgctgtcgcaccaaaagattcggacaatgacggagtcacagac
gataaagaccagtgtgcggacaccccaagcaaccatcaagtagactctagtggctgtacg
atttataaagaagtgacagaaaaacgagatgttggctctatcctatttgctaataactca
tctgttgttaagaaggaatcatacgaacgtattgaaaaattagctaactacatgaaccaa
cacccgcgttcaacagtagctatttcaggtcacgcctctaacgtaggtaaccctgagtac
aatatggacctatccgagcgccgcgctgcagcagtagccgagattttggtcaatacatat
ggcatcagcaaagatcgagtaacgtctaaaggttatggcgtcacacaacctgtcattgaa
ggaaactcagcggaagccaataaggctaaccgccgtatagaagcttatgttaccggtatt
cacaaagaggcgttgataaaataa
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