Shewanella psychrotolerans: K0I62_15220
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Entry
K0I62_15220 CDS
T09306
Name
(GenBank) OsmC domain/YcaO domain-containing protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
spsj
Shewanella psychrotolerans
Brite
KEGG Orthology (KO) [BR:
spsj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spsj03009
]
K0I62_15220
Ribosome biogenesis [BR:
spsj03009
]
Prokaryotic type
ribosomal protein modification factors
K0I62_15220
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YcaO_C
YcaO
OsmC
GNA1162-like
Motif
Other DBs
NCBI-ProteinID:
QYK00729
LinkDB
All DBs
Position
complement(3445955..3448141)
Genome browser
AA seq
728 aa
AA seq
DB search
MEIKVNFLDNLRLEAKFDDFTVTADQPIRYKGDGSAPSPFDYFLASSALCAAYFIKVYCK
ARDIPTENIRLSQNNIVDPEDRYNQIFQIQVELPEDISAKDREGILRSIDRCTVKKVVQT
GPEFKIETVENLDADANAMLMGQPEGDASTYILGKDLPLEQTISNMTGILAELGMKIEIS
SWRNIVPNVWSLHIRDAASPMCFTNGKGATKESALCSALGEFIERLNCNFFYNDQFFGLD
IANSEFVHYPNEKWFALTDDDALPAGLLDDYCLAIYNPDDELCGSHLIDTNSGNIERGIC
TIPYKRRSDGETVYFPSNLIENLFLSNGMSAGNNLQEAEVQCLSEIFERAVKRQIIEQEI
VLPDVPQAVLEKYPSILAGIKGLEEQGFPVVVKDASLGGQFPVMCVTLMNPKTGGVFASF
GAHPSFEVALERSLTELLQGRSFEGLNDVPKPTFNSMAVSEPENFVEHFIDSTGVISWRF
FSSKYDFEFCEWDFSGTNEEEAKGLFGILETLGKEVYVAEFDQLGASACRILVPDYSEVY
PVEDLIWDNTNKALDYREDILNLHSLSDDELVDLVNRFEESQLDNYTDIRTLIGIVFDEN
TVWGQLTIIELKILIYLALGAHEEAMELVGDFLQFNDNTVERGLFYQAVNAVLEVTLDEE
LELEHFIHNFKRMFGETVMENAVGSVTGEIRFSGLTKTSMALEGIEPHLRLIESYKKLHQ
ARKLKACL
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcaaagttaattttctcgacaacctgagactcgaagccaagtttgacgatttt
accgtcactgccgatcagccgattcgttataagggtgatggctctgcgccgagtccgttt
gattacttcttagcttcgtcagccctgtgcgccgcttactttatcaaggtgtattgtaag
gcgcgtgacatcccgactgaaaatatcagactgtcgcaaaataacattgtcgatcctgag
gatcgctataaccagattttccaaattcaggttgagctgccagaagatatttcggcaaag
gatcgcgaagggattttacgttcaatcgatcgttgtacggttaaaaaagtggtgcaaact
gggcctgagtttaaaatcgagacggttgaaaacctcgatgctgatgccaatgccatgttg
atgggccagcccgaaggcgatgcgagcacctacattttgggtaaagatctgccgcttgag
caaactatctctaatatgacggggattttggctgagcttgggatgaagattgagatctca
tcatggcgtaatatcgtgccaaatgtatggtcactgcatattcgtgatgcggcgtcgcca
atgtgtttcactaatggtaaaggggcaaccaaggagagcgcgctgtgctcggcattgggt
gagtttattgagcgcctaaactgtaacttcttctataacgaccagttctttgggctagat
atcgccaacagcgagtttgtgcactatcccaatgagaagtggtttgcgctcactgatgat
gacgcgctacctgcaggtttgctcgatgactattgtttagctatttacaatccagatgat
gagctgtgtgggtcgcaccttatcgataccaactcaggtaatattgagcgcgggatctgc
accattccttacaagcgtcgctccgatggggagacggtttatttcccttcaaacttaatt
gaaaacctgtttctgagtaatggcatgagtgcgggtaataacctgcaagaagctgaagtg
cagtgcctatcggagatcttcgagcgtgcggttaagcgtcaaattatcgagcaagaaatt
gtcctacccgatgtgcctcaagcagtactggaaaaatacccaagtatcttagcgggcatc
aaagggctagaggagcaaggctttcccgttgtggtgaaagatgcctccttgggcggtcag
ttccctgtgatgtgcgtgaccttgatgaaccctaaaaccggcggtgtgtttgcctcattt
ggcgcgcatccaagttttgaagtggcattagagcgcagcctgacagagctgttacaaggg
cgcagttttgaggggctaaatgatgtacctaagccgacctttaacagcatggcggtcagc
gagcctgaaaactttgttgagcactttatcgattcaacaggggtgatctcttggcgcttc
tttagcagcaagtatgactttgagttctgcgagtgggatttctctggcaccaatgaagag
gaagccaaggggctgtttggcatcttggaaaccttaggtaaagaggtatatgtggctgag
ttcgatcagctcggcgcctcagcttgccgtattttagtgcctgattactctgaggtttat
cctgttgaagatttgatttgggataacactaacaaggcactcgattaccgtgaagatatt
ttaaatcttcactcgctaagtgacgatgagttggttgatctggttaatcgttttgaagag
agccaactcgataattacaccgatattcgtacccttattggcatcgtatttgatgaaaat
accgtatggggtcagctaaccattatcgagcttaaaattcttatctatcttgcacttggt
gctcatgaagaggcgatggagctggttggcgacttcttgcagtttaacgacaataccgtc
gagcgaggcttgttctatcaagcggtaaacgcggtactcgaagtgaccttagatgaagag
ttagaacttgaacactttatccataactttaagcgcatgtttggtgaaaccgtgatggaa
aatgccgttggctctgtcactggcgagattcgattctcaggactcactaaaaccagcatg
gcgctcgaaggtattgagccgcacctgcgccttatcgagagttacaagaagctgcatcag
gcgcgtaagctcaaagcgtgcctgtag
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