Shewanella psychrotolerans: K0I62_15405
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Entry
K0I62_15405 CDS
T09306
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
spsj
Shewanella psychrotolerans
Pathway
spsj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
spsj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
K0I62_15405 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spsj03400
]
K0I62_15405 (ung)
Enzymes [BR:
spsj01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
K0I62_15405 (ung)
DNA repair and recombination proteins [BR:
spsj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
K0I62_15405 (ung)
Prokaryotic type
K0I62_15405 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QYK00762
LinkDB
All DBs
Position
complement(3490830..3491498)
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AA seq
222 aa
AA seq
DB search
MNNITNWNDFIRLQSQQAYFRQLQDFVAAERASGKVIYPSDDEVFSAFNLTPLDKVRVVL
IGQDPYHGEGQAHGLCFSVKPGIKTPPSLVNIYKELVTDIEGFEAPNHGHLVKWAEQGIL
MLNTVLTVEQGKAHSHAKAGWETFTDNALKLLDAQPKPIVFVLWGGHAIKKAKLVTQEHH
QVISGPHPSPLSAYRGFFGCGHFSKINELLAINAGTVIDWQV
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgaataatatcactaattggaatgactttattaggttgcagtcgcagcaggcatatttt
cgtcagttgcaggattttgttgcagccgagcgtgctagtggaaaagtgatttatcccagt
gacgatgaagtattcagcgcttttaatctaacccctttagataaagtgcgtgtggttctt
attggtcaagatccttatcacggagaaggacaggctcacggtttatgtttctcggtaaaa
cctggcataaaaacaccgccttcattggttaatatctataaggagctggtgactgatatt
gaggggtttgaggccccaaatcatggccatttggtcaaatgggctgagcaggggatcttg
atgttaaatacggtattaaccgtagagcagggaaaggcccattctcacgcgaaagcgggt
tgggaaacctttaccgacaatgcgttaaagttgcttgatgctcagcctaagccgattgtc
tttgtactatggggcggccatgcgattaaaaaagctaagttggtgactcaggaacatcat
caggtgatctctgggcctcacccatcgcctttatctgcatatcgcggcttttttggctgt
ggtcacttttcgaaaattaatgaattattagcaataaatgcaggcactgtgattgactgg
caagtatga
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