Shewanella psychrotolerans: K0I62_16180
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Entry
K0I62_16180 CDS
T09306
Name
(GenBank) ligand-gated channel protein
KO
K16089
outer membrane receptor for ferrienterochelin and colicins
Organism
spsj
Shewanella psychrotolerans
Brite
KEGG Orthology (KO) [BR:
spsj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spsj02000
]
K0I62_16180
Transporters [BR:
spsj02000
]
Other transporters
Pores ion channels [TC:
1
]
K0I62_16180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Porin_2
BOF
Motif
Other DBs
NCBI-ProteinID:
QYK00906
LinkDB
All DBs
Position
complement(3667130..3669130)
Genome browser
AA seq
666 aa
AA seq
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MLLSRKKYLAQLITALCLLPAVQVTNTLADTVLDKDSEMERIVVTASGFEQQIREAPASI
SVIVREDLDNRFYRDLTDAMLAVPGVVVTGGADRQDISLRGMGSQYTLILVDGKRQSSRE
TRTNSDGPGVEGAWTPPLAAIDRIEIVRGPMSSLYGSDAIGGVINIITRKVPNEWQGEVR
LDTTLQEKSVSGNVYQGNFFVNGGLIEDLLGMQLYGQYSQRQEDQIYDGYRGRDATNLTA
RFALTPNDNHDIMLELGVSSQELDSTLGKTVAPLPPGESCGRRGCPESSTTEYDNSTISL
SHTGRWDVGTLNSYIKHEVFDNKTRKMKITNTDVQSSLVTFLGDSHTATFGAAFNYQDLT
DETGNQLSDLTDINRRQWSIFSEDEWRIVDNFALTLGLRIDDDENFGNHLSPRIYGVWGV
TDSTTLKGGVSTGFRAPSLRQTVPDWGQVSRGGNMYGNPDLEPETSVNYELGLYSDLTDN
ITASAGVFYNEFKDKITRVACPITQCNDGPNQFGSDPTTYVNIDDAVTQGVELTIDYKIL
ENLGFTANYTYTDSEQKTGAYKGSPLNQLPKHLINSSLNYEPFESVNTWLRVNYRGEESQ
PTTGPSSRSLIAPSYTLLDLGANYQMNEMLKFSLGIYNAFDKEITQDEYGYVEDGRRYWL
GMTYRF
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgttgttaagtcgtaagaaatatcttgctcaattgatcactgctttatgtttgttgcct
gctgtgcaggtgaccaataccttggctgatacagtattagataaagacagtgagatggag
aggatagtcgtaaccgcctcgggatttgaacagcagatccgtgaagctcccgcctctatc
agcgtgatcgttcgtgaggatctcgacaatcgtttctaccgtgatttaaccgatgccatg
ctagcagtgcccggggttgtggtgacaggtggcgccgatcgtcaggacattagcttacga
ggtatgggcagtcaatatacgcttatcttggtagatggtaagcgccaatcctcccgcgag
actcgtaccaacagcgacggtcctggagtcgaaggggcatggacgcctccgctggccgcc
atcgataggatcgaaattgtccgcggtcccatgtcatccctttatggttctgatgcaatc
ggtggggtgattaatatcatcactcgcaaagtgcctaatgagtggcaaggcgaagtgcga
ctcgatacgacgctgcaggaaaaatcggtgtcgggcaatgtgtatcaagggaactttttt
gttaatggcggtttgatcgaagatctgcttgggatgcagttgtacggtcaatattcccaa
cgacaagaagatcagatctatgacggttatcgtggccgcgatgccactaaccttactgca
aggtttgcgcttacaccgaacgataatcatgacatcatgttggagcttggcgtatcgagc
caagagctcgacagcaccttaggtaagaccgttgcaccgctccctcctggtgaaagttgc
ggccgtcgaggctgtccggaatcttcgactacagaatatgacaacagcaccatctctctt
tctcatactggacgctgggatgttggaactttgaattcatacatcaagcatgaggttttt
gataacaagactcgtaagatgaagatcaccaacaccgatgttcagtccagcttggtaact
ttcctaggtgacagccatacggcgacctttggagccgcttttaactatcaggatttaacc
gacgaaacggggaatcaactcagcgatttaaccgatatcaaccgcagacaatggtcgatt
ttttccgaggatgagtggcgcatagtcgataactttgcgctgaccttgggacttcgaata
gacgatgatgagaacttcggcaaccatcttagccctcgtatttacggagtttggggcgtc
accgacagcaccaccttaaagggtggggtatcaaccgggtttagggctccgagtttacgt
cagaccgtgcccgattggggccaagtgagtcgtggtggcaatatgtatggtaatccagat
cttgagcccgaaacttcagttaactatgagctaggtctatattcagatctaaccgataac
ataaccgctagcgctggcgttttttataacgagtttaaggataagatcacccgtgttgcc
tgtcctattactcagtgcaacgatggtccaaaccagtttggttcagaccccaccacttat
gtgaatatcgacgatgcggtaacgcaaggcgtggagttgaccatagattataaaattctt
gaaaaccttggctttacggcaaactatacctacacagattcagagcaaaagaccggagct
tataaaggcagcccactcaatcaattgcctaagcatttaattaatagctcattaaactat
gaaccttttgagagcgtaaatacttggctaagagttaactatcgtggtgaagagagccag
ccgacgacggggccatcgtcgcgcagcttaatcgcgccttcgtacactttattggatctg
ggcgccaattatcagatgaatgaaatgctcaaatttagcttaggtatatataatgcgttt
gataaggagatcactcaagatgagtatggttatgtcgaagatggacgtcgttattggtta
ggtatgacttatcgtttctaa
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