Shewanella psychrotolerans: K0I62_17970
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Entry
K0I62_17970 CDS
T09306
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
spsj
Shewanella psychrotolerans
Brite
KEGG Orthology (KO) [BR:
spsj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spsj03021
]
K0I62_17970 (rpoH)
Transcription machinery [BR:
spsj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
K0I62_17970 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
2Fe-2S_thioredx
UCR_14kD
Fe_dep_repress
HTH_25
GntR
Motif
Other DBs
NCBI-ProteinID:
QYK01224
LinkDB
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Position
complement(4097130..4097987)
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AA seq
285 aa
AA seq
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MTSQTQSMALVVPQSSGSLEAYIHSAHNISMLEPQEEYELAKRLQETGDLQAAKQLIMSH
LRFVVHVAKGYSGYGLPQADLIQEGNIGLMKAVKRFDPDVGVRLVSFAVHWIKAEIHEYV
LKNWRIVKVATTKAQRKLFFNLRKAKKRLGWFSDEEVTMVAENLGVSKADVTEMESRMAA
QDPAFDLASDNDDDQDYSPVHYLEDHSSDLASQVENDNFESDNQTRLLAAIKTLDERSQH
ILQARWLNDEKTTLQELAETYQVSAERIRQLEKNAMNKLKGRMEV
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgacaagtcaaacgcaatcaatggcactagttgtccctcaaagcagcggtagcttagag
gcttatattcattctgcgcacaacatcagtatgttggagcctcaggaagagtatgagcta
gccaagcgtctgcaagagactggtgaccttcaggctgcgaagcagttgattatgtctcat
cttcgtttcgttgttcatgtcgctaaaggttattctggttatggcctgccacaggcagat
cttatccaagagggtaacattggtttgatgaaggcggtaaaacgttttgatcctgatgtg
ggtgtccgtcttgtctcttttgctgttcattggattaaagctgagatccatgaatatgtg
ctcaaaaactggcgtatcgttaaagtggcgaccactaaggcgcaacgcaaattgttcttc
aatctacgcaaagctaagaaacgtcttggctggtttagtgatgaagaggtgactatggtt
gccgaaaatttgggtgtctctaaagccgatgtgaccgaaatggaatcacgtatggcagcg
caagatcctgcattcgatctggcgagcgataacgatgatgatcaagattattcaccagtg
cactaccttgaagatcactcttcagatctggcttcgcaggtagaaaatgataactttgaa
tcagataaccaaactcgactgttagcagcgatcaaaactcttgatgagcgtagccaacat
atcttacaagcgcgttggttgaatgatgagaaaacgacattgcaagagctggcagaaacc
tatcaagtctctgctgagcgtatcaggcagttagaaaagaacgccatgaataagctcaaa
gggcggatggaagtctaa
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