Shewanella psychrotolerans: K0I62_18645
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Entry
K0I62_18645 CDS
T09306
Symbol
rlmF
Name
(GenBank) 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF
KO
K06970
23S rRNA (adenine1618-N6)-methyltransferase [EC:
2.1.1.181
]
Organism
spsj
Shewanella psychrotolerans
Brite
KEGG Orthology (KO) [BR:
spsj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spsj03009
]
K0I62_18645 (rlmF)
Enzymes [BR:
spsj01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.181 23S rRNA (adenine1618-N6)-methyltransferase
K0I62_18645 (rlmF)
Ribosome biogenesis [BR:
spsj03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
K0I62_18645 (rlmF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltransf_10
MTS
PrmA
Cons_hypoth95
Motif
Other DBs
NCBI-ProteinID:
QYK01339
LinkDB
All DBs
Position
complement(4251515..4252573)
Genome browser
AA seq
352 aa
AA seq
DB search
MNQPRAARRSSGKIKPANSQVEPRSPKGFHPRNLHRDGYDFMALIEHTPYLKGFVRPNPY
GNLSIDFSDPVAVKTLNLALLRLHYHIEFWDIPQGFLCPPIPGRVDYLHYIADLLSDDAA
SNSATKRAVKPPKGQKIKVLDIGTGANGIYPILGVQSYGWHFVASDIDSCSVSNVQHIID
QNSCLQGKVELRLQSTQQAIFNGMIKQGERFDVTMCNPPFHASLAEATAGSERKLKNLAS
NRLAKGHDKVSVKSTDKLNFGGQKAELWCDGGELRFLLDMIKESHEFSSQCLWFTSLVSK
KENLKPCYRALEQLGAVTVKTIDMAQGNKLTRVLAWSFLEPRQRELWHQYRC
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaaccagcctcgcgcagctcgtcgatcttccggcaaaattaaacctgcaaattctcaa
gttgaacctaggtcacctaaaggttttcaccccagaaatttacatcgagacggttatgat
tttatggcgttgattgagcacactccatatcttaaaggttttgttaggccaaacccttat
ggcaacctttctattgatttttccgatcccgtggcggtaaaaacattgaatctagcattg
ctgcgcctacattatcacatcgaattctgggatattccccaaggttttctgtgtccaccg
atccctggccgagtagactacttacattatattgccgatttactttccgatgatgcagcg
agtaacagcgcgacaaaacgcgcggttaaaccccctaaagggcaaaagattaaggtgctt
gatatcggaacgggagccaacggaatttatcctattctcggggtgcagagttatggctgg
cattttgttgctagcgatatcgattcttgctcagtatccaatgtgcaacatatcattgac
caaaactcctgtttacagggaaaggtggagctgagattacagtctactcagcaggctatt
tttaacggcatgatcaaacagggggagcgcttcgatgtaactatgtgtaatccgcctttt
catgcctctcttgccgaggcaaccgcgggtagcgagcgtaaattgaaaaatttagcctca
aatcgcctcgctaaaggtcacgacaaggtaagtgttaaatcgactgacaaacttaatttt
ggtggccaaaaagctgagctgtggtgcgatggcggcgagttgcgattcttgctcgatatg
attaaggaaagccatgaattttcgagtcaatgcttgtggtttaccagcttagtatctaaa
aaagagaacctaaaaccttgttatcgagcactcgaacagctaggcgctgttaccgtgaag
accatcgatatggctcaaggtaacaagttgactcgagtgctggcttggagttttcttgaa
cctcgccagcgtgagttatggcatcaatatcgctgctga
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