Sphingomonas sp. So64.6b: G4G27_01790
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Entry
G4G27_01790 CDS
T11422
Name
(GenBank) Crp/Fnr family transcriptional regulator
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
spso Sphingomonas sp. So64.6b
Pathway
spso02020
Two-component system
spso02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
spso00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
G4G27_01790
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
G4G27_01790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spso03000
]
G4G27_01790
Transcription factors [BR:
spso03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
G4G27_01790
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HTH_Crp_2
cNMP_binding
MarR_2
HTH_11
HVO_A0261_N
GntR
HTH_20
HVO_A0114
Motif
Other DBs
NCBI-ProteinID:
QNA82882
LinkDB
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Position
complement(384652..385353)
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AA seq
233 aa
AA seq
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MDTAEPTTVGIINRENWIGALPAPVREAIEARMTRFTVAPGMPVKRAGEAATRIFQVETG
FLSLIGLHVDGRQALITIYAAGNCFSETAMIVRREHNHTTIALTPAVVRQLERDDFWELY
HRHPEIPEALCRKFAEAISRQMASREQRATQRLGQRIATMFANLAEHAGESVVGGETRIL
LPITQSNIADIFDVTRQSVHREVSHLKQLGIVDKRHGDWVVIDSERLRQICSY
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atggatacggccgagccgacgaccgtcggcatcatcaatcgcgagaactggatcggcgcg
cttcccgcacccgtccgggaggcgatcgaggcgcggatgactcgctttaccgtggcaccg
ggcatgccggtcaagcgcgccggcgaagcggcgacccgcatctttcaggtcgagaccggt
ttcctgagcctgatcgggcttcacgtcgacggccgacaggcgctgatcaccatttatgct
gccggcaactgtttcagcgaaaccgcgatgatcgtccggcgcgaacataaccataccacc
atcgcactaacgccagcggtggttcgccaactcgagcgcgacgatttctgggagctctat
caccgccatcccgaaatccccgaagccttgtgccgcaagttcgccgaagcgatctcgcgc
cagatggcgagccgcgaacagcgcgccacgcagcgtcttggccagcgcatcgccacgatg
ttcgcaaacctggccgagcatgccggcgaatcggtcgtcggaggggaaacccggattctg
ttgccgatcacacagtccaacatcgccgacatcttcgacgtgacgcggcaaagcgtgcat
cgtgaggtcagccacctcaagcaactcggaatcgtcgacaagcgccacggcgattgggtg
gtgatcgatagcgagcggttgcggcagatctgctcttactag
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