Sphingomonas sp. So64.6b: G4G27_01895
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Entry
G4G27_01895 CDS
T11422
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
spso Sphingomonas sp. So64.6b
Brite
KEGG Orthology (KO) [BR:
spso00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spso03032
]
G4G27_01895
03036 Chromosome and associated proteins [BR:
spso03036
]
G4G27_01895
03400 DNA repair and recombination proteins [BR:
spso03400
]
G4G27_01895
DNA replication proteins [BR:
spso03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
G4G27_01895
Chromosome and associated proteins [BR:
spso03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
G4G27_01895
DNA repair and recombination proteins [BR:
spso03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
G4G27_01895
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
QNA82900
LinkDB
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Position
complement(404680..404958)
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AA seq
92 aa
AA seq
DB search
MIRSELVDMLAQDNPDLALRDVEAIVSTFFDEISRRLAADGRVELRGFGAFSTRARDART
GRNPRTGETVDVVAKRVPYFKPGKEMRARLNV
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atgatccgatccgagcttgtcgacatgctggcccaggacaatcccgacctcgcgctgcgc
gacgtcgaggcgatcgtcagcacctttttcgacgagatttcccgccgcttggccgccgat
ggccgggttgagttgcgcggcttcggtgccttttcgacccgagcgcgcgacgcccgcacc
ggccggaacccacgcaccggcgaaaccgtcgacgtggtcgccaagcgcgtgccctatttc
aaaccgggcaaggaaatgcgcgcacgtctcaacgtgtga
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