Sphingomonas sp. So64.6b: G4G27_08400
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Entry
G4G27_08400 CDS
T11422
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
spso Sphingomonas sp. So64.6b
Brite
KEGG Orthology (KO) [BR:
spso00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spso03400
]
G4G27_08400 (addB)
Enzymes [BR:
spso01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
G4G27_08400 (addB)
DNA repair and recombination proteins [BR:
spso03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
G4G27_08400 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
QNA84007
LinkDB
All DBs
Position
complement(1765030..1767999)
Genome browser
AA seq
989 aa
AA seq
DB search
MGEGRKPSLYTIPAHRAFADALTAGLIKRFGGEPMGLARGLVLLPNNRAKRALTDAFVRA
SGGGLLLPRLVAIGDPSLDEAAGAALDPADGLDPVPPAVAPLQRRMILARLVSEERARAG
QPVDAAEAVRLAGELARTLDQLLVEDIAPAKLRELELTQELSNHWQKALALFGTVIDRWP
AELKALGRIDLANRRSLLLGRLAGRWRGEPPAGFVCAAGITDSAPAVAQLMRCVSELPQG
MVVLADLALEMDESEWLALGPHKPDPATGQRRRSIETHPQFHMKLLLERMSVNRGEFSVW
REGGGHDATIARGRAIANALAPAEFTGKWTTLDADQRRLSGIVAAELATPAEEAQAIALA
LREVLETESKTAALVTPDRALARRVAAHLGRWGIEIDDTAGRPLSILPSGTLLTALAEAA
VQRFAPLALLALLKHPLVRFGEGRTAWLDGARSLDRVLRGPRPAAGLTGIDAHLAEAPER
EEKRRAEAAIWWPEARALLAPIEAMFAGGAQPLPAMVAALRETAQALCGDALWGGPAGRA
AAELLAELEAQAANGPALIEPESLAPLLKTLMDEVAVRPPQGGHPRLAIYGLIEARLQTA
DLMILGGLNEGTWPGQPAPDPWLAPRIRSELGLPGLERRVGVSAHDLASALGAPGALLTR
ARRDAKSPAIASRFWLRLQALAGDRFERAVELEGWNRALDDPGEHLPESQPAPSPPAELR
PKRIAVTDVDRLKADPYAFYAKRILRLMPLDPVDADPSAAWRGSAVHEVLETWARQDQCD
PTKLHARALTMLADAHPLMQALWQPRLIEAIDWIVAETARHIAEGRTLVAVEQDGKCEIA
GVTLTGKFDRVDRLPGGGLAIIDYKTGKPPSAAAVAEGYSLQLGLLGLIAEHGGFADARG
RADAFEYWSLSRKNGKFGYVESPVDPEGKRGRIPTADFTTVAARNFTAAVREWLTGDAPF
TAKLHPEYAPYADYDQLMRRDEWYGRERG
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atgggtgagggccgcaagcccagcctctatacgatcccggcgcaccgggcctttgccgat
gcactgacggcaggactaatcaaacgcttcggcggtgagccgatggggctcgcgcgtggc
ctcgtgctgctacccaataatcgcgccaaacgcgcgctgaccgatgcctttgtccgcgcg
agtggtggcggcctgttgttgcctcggctggtagcgatcggcgatccgtcactcgacgag
gcggcaggcgcggcgctcgatcccgcagatggtctcgatccggtgccaccagcggtagcg
cccttgcagcgccggatgatcctcgcgcgactggtgtcggaggagcgcgcacgcgccggc
cagccggtcgacgcggccgaggcggtgcggctcgccggggaactggcgcgcacgctcgat
caactgttggtggaggatattgcgccggccaagctgcgcgaactggaactgacgcaggaa
ttgtccaaccattggcaaaaggcgctggcgctgttcggcacggtgatcgatcgctggccg
gcggaactcaaggcgctgggacgcatcgaccttgctaaccggcgctccctgttgctggga
cgcctcgctggtcgctggcgcggcgaaccgcccgccggcttcgtatgcgcggccggcatc
accgacagcgcacctgcggtggcgcagttgatgcgttgcgtgtcggaactgccgcagggc
atggtggtgctcgccgatctcgcgcttgagatggacgagagcgaatggctcgcactcggt
ccgcacaaacccgatccggcgacgggccagcgtcgtcgctcgatcgagactcatccgcaa
tttcatatgaagctgctgctcgaacgaatgagcgtcaatcgcggcgagttcagcgtgtgg
cgcgagggcggcggacatgacgcaaccatcgcgcgtggccgcgccatcgccaatgcgctc
gctccggccgaattcaccggcaaatggaccacgctcgatgcggatcagcgtcgattatct
gggatcgtcgcggccgaactggctacccccgcggaagaggcacaggcgatcgcgctggcc
ttgcgcgaggtgctggagaccgaaagcaagaccgctgcactggtcacgcccgatcgcgcg
ctggcgcggcgggtggccgcgcacctcgggcgctgggggatcgagatcgacgacactgcc
ggtcgacccctgtcgatcctgccatcgggcaccttgctgaccgcgctggccgaggcggca
gtacagcgcttcgcgccgcttgcgctgctcgcattgctcaaacatccgctggtccggttc
ggcgaagggcggacggcatggctcgatggcgcgcgtagtctcgatcgggtgttgcgcgga
ccacgtccggccgctggattgacggggatcgacgcgcatcttgccgaggcacccgaaaga
gaggaaaaacgccgcgccgaagcggcgatatggtggcctgaagcgcgcgcgctgctggcg
ccgatcgaggcgatgtttgccggcggcgcgcaacctttgccagcgatggtcgccgctctg
cgcgaaacggcacaagctttgtgcggcgatgcgctgtggggcggtccggcggggcgcgct
gcggccgaactgctcgccgagttggaagcgcaggcggcaaatggcccggcgctgatcgag
cccgaaagcctcgcgccgttgctcaagacattgatggacgaagttgcggtgcgaccgccg
caaggcgggcatccccggctggcgatctacggcctgatcgaagcacgactgcaaaccgcc
gatttgatgatccttggcgggttgaacgaaggcacctggccgggccagcccgcacccgat
ccctggctcgcgccgcggatccggagcgagcttggtttgcccgggctggaacgccgcgtc
ggcgtatcggcgcatgatctcgccagcgcgctgggtgcgccgggcgcactgctcacccgg
gcgcgacgcgatgcgaagtcgccggcgatcgcctcgcgcttctggttgcggctccaggcg
ctggccggcgaccgtttcgaacgcgcggtggagctggaaggttggaaccgcgcgcttgac
gacccgggcgaacatttgcccgaatcccaacccgcgccgtcgccaccggccgaactgcgc
ccgaaacgcatcgcggtaaccgatgtcgatcggctcaaggccgacccctatgctttctat
gccaagcgcatcctgcgtttgatgccgctcgatccggtcgatgccgatcccagcgcggca
tggcgcggcagcgcggtgcatgaggtgctcgaaacttgggcgcgtcaggatcagtgcgac
ccgaccaagcttcacgcgcgtgcgctgaccatgctcgccgatgcgcatccgttgatgcag
gcattgtggcagccgcgcctgatcgaggcgatcgactggatcgtcgcggaaacggcgcgc
catatcgcggaagggcgcaccttggtcgcggtcgagcaggacggcaaatgcgagatcgcc
ggcgtcacgctgaccggcaagttcgaccgggttgatcgcctgcccggcggagggctggcg
atcatcgactacaagaccggcaagccgccttccgccgcagcggttgcggaaggctatagc
ctgcagcttggcctgcttggcctgatcgccgaacatggcgggttcgccgatgccaggggc
cgggcggatgcgttcgaatattggtcgctttcgcgcaagaacggcaagttcggttatgtc
gaaagcccggtcgatcccgagggtaagcggggccgcatcccgaccgccgatttcaccacc
gtcgccgcacgcaacttcaccgcggcggtgcgtgaatggctgaccggcgatgcgccgttc
accgccaagctccaccctgaatatgcgccttatgccgactatgatcagctgatgcgccgc
gatgaatggtatggccgtgagcgtggataa
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