Sphingomonas sp. So64.6b: G4G27_08770
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Entry
G4G27_08770 CDS
T11422
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
spso Sphingomonas sp. So64.6b
Pathway
spso03030
DNA replication
spso03430
Mismatch repair
spso03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spso00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
G4G27_08770
03430 Mismatch repair
G4G27_08770
03440 Homologous recombination
G4G27_08770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spso03032
]
G4G27_08770
03400 DNA repair and recombination proteins [BR:
spso03400
]
G4G27_08770
Enzymes [BR:
spso01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
G4G27_08770
DNA replication proteins [BR:
spso03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
G4G27_08770
DNA repair and recombination proteins [BR:
spso03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
G4G27_08770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DNA_pol3_delta2
DUF3646
DNAX_ATPase_lid
AAA
AAA_22
AAA_5
RuvB_N
AAA_30
AAA_19
AAA_16
AAA_14
DUF815
AAA_18
AAA_assoc_2
PIF1
AAA_24
Adeno_E1B_55K_N
Glyco_tranf_2_5
Motif
Other DBs
NCBI-ProteinID:
QNA84070
LinkDB
All DBs
Position
complement(1838084..1839736)
Genome browser
AA seq
550 aa
AA seq
DB search
MSDSFDLGEPPQPKAEVYRVLARKYRPQTFAELIGQDAMVTTLGNAIKRGRLAHAFLLTG
VRGVGKTSTARLIAKALNCIGPDGEGGPTIDPCGVCEPCRAIAEGRHIDVIEMDAASHTG
VDDVREIIDASRYAAVSARYKIYIIDEVHMLSKNAFNALLKTLEEPPAHVKFLFATTEVN
KVPVTVLSRCQRFDLRRISSESLAAHFAHVAEAEGVEAEPEALGLIARAAEGSARDGLSI
LDQAIAHAGIEGGGVKALAVREMLGLSDRGAVRDLLGVLLTGDGIGALTALRRQYDLGVD
PQAVMRALLEAVHATTLVKLGTVPEAGQAVEEREALETWANGLSFAALHRLWQLLLKGHD
EVARAALPIEACEMALLRVVHASTLPDPGELARQLAAGGPAPAAIAPTPPPASANGAPIG
SAVGSAFPADFPALVAYLDDQGEAALAARLSYSASVVRYTPPELVLSSARPMPADFVREL
MLELKRITGKQWKVSAEDVPGDPTLNEVKLAAADAERAAILETPVVKAAFAAFPDAVLDS
WTTEVRSNEA
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgtccgactccttcgatctcggcgaaccgccccagcccaaggctgaggtctatcgcgtc
ctcgcccgtaaataccggccgcagacctttgccgagctgatcggccaggatgcgatggtc
accacgctcggcaatgcgatcaagcgcgggcgtctggcgcatgcctttctccttaccggg
gtacgcggggtcggtaagacatcgaccgcgcgactgatcgccaaagcgctcaactgcatc
ggtccggacggcgagggcggcccgacgatcgatccctgcggtgtgtgcgaaccatgccgc
gcgatcgccgaagggcgccatatcgacgtgatcgagatggatgccgcgagccataccggt
gtcgatgacgtgcgcgagatcatcgatgcgtcgcgttatgcggcggtgtcggcacgctac
aagatctatatcatcgacgaagttcatatgctgtcgaaaaacgccttcaatgcgctgttg
aagacgcttgaggaaccaccggcgcacgtgaaattcctgttcgccacgaccgaggtcaac
aaggtgccggtgacggttttgtcgcgctgccagcgtttcgacctgcgccgtatctcgtcc
gaatcgctcgctgcgcatttcgcccatgtcgccgaagccgagggcgtcgaggccgaaccc
gaggccttgggactgatcgctcgcgctgcggaaggatcggcgcgtgacgggctgtcgatc
ctcgatcaggcgatcgcccatgccgggatcgaaggtggcggggtcaaggcgttggcggtg
cgggagatgctcggcctgtcggatcgcggcgcggtgcgcgacctgctgggcgtgctgctg
accggcgacggaatcggcgcgctgacggcgctcagacggcaatatgatctcggagtcgat
ccgcaggcggtgatgcgcgcgttgcttgaggcggtccatgcgaccaccctggtaaagctc
ggcaccgtgcctgaagcgggtcaggcggtcgaagaacgcgaagcgcttgagacatgggcg
aacggcctgtccttcgccgccttgcaccggctctggcaattgctgctcaagggtcatgat
gaagtcgctcgcgccgctttgccgatcgaggcctgtgagatggcgttgttgcgcgtcgtc
catgcatcgaccttgcccgaccccggcgaattggcgcggcaattggcggcgggcggaccc
gcgcctgccgcaatcgccccaacgccgccgccggcaagcgcgaacggtgcgccgattggt
tcggccgtcggttcggcatttccggccgattttcctgcgctcgtcgcttatctcgacgat
cagggcgaggcggcactggcggcgcggctgagctacagcgcgagcgtggtgcgttatacc
ccgcccgaactggtactcagctcagcccggccaatgcccgcggatttcgtgcgtgagttg
atgctcgaattgaaacgtatcaccggtaagcagtggaaggtttcggcggaggatgtgccg
ggcgatccgacactcaacgaggtgaagctggcggcggcagatgccgaacgcgcggcgata
ttggagaccccggtggtcaaggcggcgttcgcggcattccctgacgccgtgctggatagc
tggaccacagaagtacggagcaacgaagcatga
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