Sphingomonas sp. So64.6b: G4G27_10525
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Entry
G4G27_10525 CDS
T11422
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
spso Sphingomonas sp. So64.6b
Pathway
spso03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spso00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
G4G27_10525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spso03019
]
G4G27_10525
03009 Ribosome biogenesis [BR:
spso03009
]
G4G27_10525
Enzymes [BR:
spso01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
G4G27_10525
Messenger RNA biogenesis [BR:
spso03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
G4G27_10525
Ribosome biogenesis [BR:
spso03009
]
Prokaryotic type
rRNA helicases
G4G27_10525
BRITE hierarchy
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Other DBs
NCBI-ProteinID:
QNA84373
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Position
2206393..2208114
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AA seq
573 aa
AA seq
DB search
MPFSNLPPLLSEALTARGYAAPTPVQAGVLEPEALGRDLLVSAQTGSGKTVAFGLAMAAQ
LLEEDGRLPQQGPLALVIAPTRELALQVSRELMWLYANTGGRIVTCVGGMDASKERRALN
HGAHIVVGTPGRLRDHLERGALDLSKLRVAILDEADEMLDMGFREDLEQILDGTPSERRT
MMFSATIPKPIAALAKRYQRDAVRISTVGEDRGHGDIAYQAVSCAPADIENVVVNLLRFH
EAETAMLFCATRDNVRHLHAGLIERGFSAVALSGEHSQNERNAALQALRDQRARICVATD
VAARGIDLPTLSLVVHVELPRDAETLQHRSGRTGRAGKKGTAVLIVPYPRRRRVESMLKG
ARINAEWINPPTLEDISAKDHERLLVTLLEPVEVDDDDRALGAKLLETRSAEDIAAALVR
LHRARMPAAEELLGGGGGSDPAPRQDGHRPGFEDIVWFRMDIGRRQNADPRWLLPLICRR
GHITKSEIGAIRISANETLFQIPRAVASRFNASVLRTAGAEAGDEGGIKIESVQGEPREA
ERRPRLTPSARPSGPPTARHKPKPFRRTNDRQR
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgcctttttccaaccttcctccgcttctttccgaagcgctcaccgcacgcggctatgcc
gccccgactccggttcaggccggcgtgctcgagcccgaagcgctcggccgcgacctgctc
gtgtccgcgcagaccggctcgggcaagaccgtcgcctttggtctcgccatggcggcgcag
ctgcttgaagaggatggccgcctgccgcagcaagggccgctcgcgctggtcatcgcgccg
acgcgcgaactggcgttgcaggtcagccgcgagctgatgtggctctacgccaataccggc
ggacgcatcgtcacttgcgttggcggcatggacgcatcgaaggagcgtcgcgcgctcaat
cacggtgcgcatatcgtggtcggcacgccgggtcgtttgcgcgaccatctcgagcgcggc
gcgctcgacctgagcaagctgcgcgtcgcgatcctcgacgaagcggatgagatgctcgac
atgggtttccgcgaggatctcgaacagattctcgacggcacgccgagcgagcgccgcacg
atgatgttctcggccaccatccccaagccgatcgcggcacttgccaagcgttatcaacgc
gatgcggtgcgtatctcgaccgtgggcgaagaccgcggccatggcgacatcgcttatcag
gcggtaagctgtgcccccgccgatatcgagaatgtcgtggtcaatctgctgcgctttcat
gaagccgaaaccgcgatgctgttctgcgcgacgcgcgacaatgtccgccatcttcacgcc
ggtctgatcgagcgcggcttcagcgcggtcgcattgtcgggcgagcatagccagaacgaa
cgcaacgccgcgctccaggcgctgcgcgaccagcgcgcgcggatctgcgtcgcgaccgat
gtcgccgcacgcggcatcgatctccccacgctcagtctggtcgtccatgtcgaactgccg
cgcgatgccgagacgctgcagcatcggtcgggccgcaccggccgcgcaggcaagaagggc
accgcagtgctgatcgtgccctatccgcgccgtcgccgtgtcgaatcgatgctgaaaggc
gcacgaatcaatgccgagtggatcaacccgccaacgctcgaggatatcagcgccaaggat
cacgagcgactgctcgtcacgctgctcgaaccggtcgaggttgacgacgacgatcgcgca
ctcggcgccaagctgctcgaaacgcgtagtgcggaagatatcgctgcggcgctggtacgc
ctgcaccgcgcacgcatgccggcggccgaagaactgctgggtggtggcggcggcagcgat
cccgcgccgcgccaggacggccatcggcccggtttcgaggacatcgtctggttccgcatg
gatatcggccgccgccagaatgccgatccgcgctggttgctgccactgatctgccgtcgc
gggcatatcaccaagagcgagatcggcgcgatccgcatctcggccaacgaaacgctgttc
cagatcccgcgcgcggtcgcgtcacggttcaatgcgtcggtcctgcgcaccgccggcgcc
gaagccggtgacgagggcggcatcaagatcgaaagcgtccagggtgaaccgcgcgaggcg
gaacgccgtccccgcctgacgccgagcgcgcgccccagcggcccaccgaccgcgcggcac
aagcccaagccgtttcgccgcaccaatgatcggcaacgctga
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