Sphingomonas sp. So64.6b: G4G27_14395
Help
Entry
G4G27_14395 CDS
T11422
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
spso Sphingomonas sp. So64.6b
Pathway
spso03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spso00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
G4G27_14395 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spso03019
]
G4G27_14395 (groL)
03110 Chaperones and folding catalysts [BR:
spso03110
]
G4G27_14395 (groL)
03029 Mitochondrial biogenesis [BR:
spso03029
]
G4G27_14395 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spso04147
]
G4G27_14395 (groL)
Enzymes [BR:
spso01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
G4G27_14395 (groL)
Messenger RNA biogenesis [BR:
spso03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
G4G27_14395 (groL)
Chaperones and folding catalysts [BR:
spso03110
]
Heat shock proteins
HSP60 / Chaperonin
G4G27_14395 (groL)
Mitochondrial biogenesis [BR:
spso03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
G4G27_14395 (groL)
Exosome [BR:
spso04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
G4G27_14395 (groL)
Exosomal proteins of other body fluids (saliva and urine)
G4G27_14395 (groL)
Exosomal proteins of breast cancer cells
G4G27_14395 (groL)
Exosomal proteins of colorectal cancer cells
G4G27_14395 (groL)
Exosomal proteins of bladder cancer cells
G4G27_14395 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Mu_Gam-Sipho_Gp157-TOTE
Motif
Other DBs
NCBI-ProteinID:
QNA85053
LinkDB
All DBs
Position
complement(3006051..3007694)
Genome browser
AA seq
547 aa
AA seq
DB search
MAAKDVKFSRDARERILRGVDILADAVKVTLGPKGRNVVIDKSFGAPRITKDGVTVAKEI
ELRDKFENMGAQMLREVASKTNDIAGDGTTTATVLAQAIVREGMKSVSAGMNPMDLKRGI
DLAVIEVVKDLKARSKPVSGTKEIAQVGIISANGDTVVGEKIAEAMEKVGKEGVITVEEA
KGLEFELDVVEGMQFDRGYLSPYFITNPEKMSVELADPYILIHEKKLANLQAMLPILEAV
VQSGRPLLIIAEDIEGEALATLVVNKLRGGLKVAAVKAPGFGDRRKAMLEDIAILTKGEM
ISEDLGIKLESVTIGMLGTAKRVTIDKDNTIIVDGAGDHDAIKGRTDAIRQQIENTTSDY
DKEKLQERLAKLAGGVAVIKVGGSTEVEVKERKDRVDDALHATRAAVEEGIVPGGGTALL
YATKALAGLKGANDDQTRGIDIVRKALETPLRQIAQNAGVDGAVVAGNLLRENDETRGFN
AQTDQYENLVESGVIDPTKVVRTALQDAASVAGLLITTEAAISELPEDKPAMPMGGGGMG
GMGGMDF
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggcagccaaggacgtaaaattttcgcgtgacgcgcgtgaacgcattctgcgcggcgtc
gacattctcgccgacgcggtaaaggtcacgctggggccaaagggccgcaacgtcgtgatc
gacaagagcttcggcgcaccgcgcatcaccaaggacggcgtcaccgtcgccaaggaaatc
gagctccgcgacaagttcgagaacatgggtgcgcaaatgctgcgcgaagtggcctcgaag
accaacgacatcgccggcgacggcacgaccaccgcgaccgtcctggcgcaggcgatcgtc
cgtgaaggcatgaagtcggtttcggccggcatgaacccgatggacctgaagcgcggcatc
gacctcgcggtcatcgaagtcgtcaaggatctcaaggcgcgctccaagcccgtctcgggc
accaaggaaatcgctcaggtcggcatcatctcggccaatggcgacaccgtcgtcggcgag
aagatcgctgaagcgatggaaaaggtcggcaaggaaggcgtgatcaccgtcgaggaagcc
aagggcctcgaattcgaactcgatgtcgtcgaaggcatgcagttcgaccgtggttacctc
tcgccttacttcatcaccaacccggaaaagatgtcggtcgaactcgccgatccgtacatc
ctgatccatgaaaagaagctggcgaacctgcaggcgatgctcccgattctggaagccgtc
gttcagtcgggccgtccgctcctgatcatcgccgaggacattgagggtgaggctctcgcc
acgctcgtcgtcaacaagctgcgcggcggcctgaaggtcgcagcggtcaaggcgcctggc
ttcggcgatcgccgcaaggcgatgcttgaggacatcgcgatcctgaccaagggcgagatg
atctcggaagacctcggcatcaagctcgagagcgtcacgatcggcatgctcggcaccgcc
aagcgcgtcacgatcgacaaggacaacaccatcatcgtcgatggtgccggtgaccatgac
gcgatcaagggccgtaccgacgcgatccgccagcagatcgagaacaccaccagcgattac
gacaaggagaagctccaggagcgtcttgccaagctcgccggcggcgttgccgtgatcaag
gtcggcggttcgaccgaagtcgaagtcaaggagcgcaaggatcgcgtcgacgacgctctc
cacgcaacccgcgcagcggtcgaagaaggcatcgtccccggcggcggcacggctctgctg
tacgccaccaaggctcttgccggcctgaagggcgcgaacgacgaccagacccgcggcatc
gacatcgtgcgcaaggcgctcgagacgccgctgcgccagatcgcccagaacgctggtgtc
gatggtgcggttgttgccggcaatctgctgcgtgaaaacgacgaaacccgtggtttcaac
gcacagaccgaccagtatgaaaacctcgtcgagagcggcgtgatcgacccgaccaaggtc
gtccgcaccgcactgcaggacgcggcctcggtcgccggcctgctgatcaccaccgaagcg
gcgatcagcgaactgccggaagacaagcctgccatgcccatgggcggcggcggcatgggc
ggcatgggcggtatggatttctga
DBGET
integrated database retrieval system
