Sphingomonas sp. So64.6b: G4G27_19210
Help
Entry
G4G27_19210 CDS
T11422
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
spso Sphingomonas sp. So64.6b
Pathway
spso03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
spso00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
G4G27_19210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spso03400
]
G4G27_19210
Enzymes [BR:
spso01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
G4G27_19210
DNA repair and recombination proteins [BR:
spso03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
G4G27_19210
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
QNA85869
LinkDB
All DBs
Position
complement(4025551..4026345)
Genome browser
AA seq
264 aa
AA seq
DB search
MSDTLKIVSWNINSVRFRIEIVEQFLREVAPDILCLQETKVIDGDFPAAPFRALGYDHIF
LHGQKMHHGVAIISRVPLIEDDRFDWQANLEARHIGVRLPNGLRVENVYVPAGGDIPNRE
VNPKFGQKLDFVERMTRWSEGLNVPTLLVGDFNIAPLECDVWSHKQLLDVVSHTPIEVAA
LDGLKASNDWVDLGRHFHPDPARLFTWWSYRAKDWQLSDRGRRLDHMWATADVAGTAIGH
TVFEDCRNWLKPSDHVPIMTEFAL
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacacgctcaaaatcgtttcatggaacatcaattcggtgcggtttcgtatcgag
atcgtcgaacaattcctgcgcgaggtcgcgcctgacatattgtgcctgcaggaaaccaag
gtgatcgacggggactttcctgccgcgccgttccgcgcgctgggttacgaccatatcttt
ctgcacgggcagaagatgcatcacggtgtcgcgatcatcagccgtgtaccgctgatcgag
gacgaccgcttcgactggcaggccaatctggaggcgcggcatatcggcgtcaggctgccg
aacggcttgcgcgtcgaaaatgtctatgtgcccgccggcggcgatattcccaatcgcgag
gtgaatcccaaattcggtcagaagctcgattttgtcgagcgcatgacgcgctggtcggaa
gggctgaacgtgccgacgttgctggtcggcgatttcaatatcgcaccgctcgaatgcgat
gtgtggagccacaagcaattgctcgacgtggtcagccacacgccgatcgaggtcgctgcg
ctcgacggattaaaagcctcgaacgactgggtcgatctcgggcggcatttccaccccgat
ccggcgcgcctgttcacctggtggagctatcgcgccaaggactggcaattgtcggatcgc
gggcggcggctcgaccatatgtgggcgaccgccgatgtcgccgggacggcgatcgggcac
accgtgttcgaggattgccgcaactggctcaaaccctcggaccatgttccgatcatgacc
gaattcgcgctgtga
DBGET
integrated database retrieval system
