Sphingomonas sp. So64.6b: G4G27_20950
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Entry
G4G27_20950 CDS
T11422
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
spso Sphingomonas sp. So64.6b
Pathway
spso03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spso00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
G4G27_20950 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spso03019
]
G4G27_20950 (pnp)
03016 Transfer RNA biogenesis [BR:
spso03016
]
G4G27_20950 (pnp)
Enzymes [BR:
spso01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
G4G27_20950 (pnp)
Messenger RNA biogenesis [BR:
spso03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
G4G27_20950 (pnp)
Transfer RNA biogenesis [BR:
spso03016
]
Prokaryotic type
tRNA degradation factors
G4G27_20950 (pnp)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
QNA86174
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Position
complement(4372994..4375384)
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AA seq
796 aa
AA seq
DB search
MFDTKTVSTQWGGKTLTLETGRVARQADGAVIATLGETVVLCAVTAAKSVKEGQDFFPLT
VHYQEKFSASGRIPGGFFKRERGATEKETLTSRLIDRPIRPLFPEGFYNEINVICQVLSY
DGENEPDILAMVAASAALTISGVPFMGPIGAARVGYVDGEYILNPTTELTKSGELDLVVA
ATGDAVMMVESEAKELSEEIMLGAVQFAHKACREVANLIIDLAEQAAKDPWEMAAQADLS
AAKDKLKKLIGKDIAAAYKVTDKSKRSNLLNEARAKGKTAFADAAPQDQMAAGKLMKKLE
AEIVRGAILKDGKRIDGRTTTQIRPIEAMVHFLPRTHGSALFTRGETQAICTTTLGTKES
EQMIDGLTGLSYENFMLHYNFPPYSVGEVGRFGAPGRREVGHGKLAWRALHPVLPTKEEF
PYTIRVLSDITESNGSSSMATVCGGSLSMMDAGVPLKRPVSGIAMGLILEGKDFAVISDI
LGDEDHLGDMDFKVAGTSEGITTMQMDIKIAGITEEIMRKALAQAKEGRAHILDEMAKAL
DHTREELSAHAPRIETITIDKSKIREVIGTGGKVIREIVATTGAKVDIDDEGVIKVSSSD
TAQIEAAIKWIKGLVEEAEVGKVYDGKVVNLVDFGAFVNFMGGKDGLVHVSEIRNERVEK
VSDVLSEGQEVKVKVLEIDPRGKVRLSMRVVDQETGAELEDSRPAREPREGGDRGPRGPR
RDGDGGRGPRGEGRGDGGGRGDGGGRGDRGPRRDGGDRGPRRDGGGDRGPRPERSGGNDD
GPAPEFAPAFLTGDRD
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgttcgatacgaaaactgtaagcacccagtggggcggcaagaccctcacgctggaaacg
ggccgcgttgcccgtcaggccgatggcgcggtcatcgcgacgctcggcgaaaccgtcgtg
ctgtgcgccgtcaccgccgccaagtcggtcaaggaagggcaggatttcttcccgctcacc
gtccactaccaggaaaaattctcggcttcgggccgcatccctggcggcttcttcaagcgt
gaacgcggcgcgaccgaaaaggaaacgctgaccagccgcctgatcgatcgtccgatccgt
ccgctgttcccggaaggcttttacaacgagatcaacgtgatctgccaggttctcagctat
gacggcgagaacgagcccgacatcctcgcgatggttgcggcatcggcggcactgacaatc
tcgggcgtgccgttcatgggcccgatcggcgcggcgcgcgtcggttatgtcgatggcgaa
tatatcctcaacccgaccaccgaactgaccaagtcgggcgagctcgacctggtcgtcgcc
gccaccggcgatgccgtgatgatggtcgaatccgaagccaaggagctgtcggaggagatc
atgctcggcgcggtgcagttcgcgcacaaggcatgccgcgaagtcgccaacctgatcatc
gacctggccgagcaggccgccaaggatccgtgggaaatggccgctcaggccgatctctcg
gccgccaaggacaagctgaagaagctgatcggcaaggacatcgccgccgcatacaaggtg
accgacaagtccaagcgttcgaacctgctcaacgaggcacgcgccaagggcaagaccgcc
tttgccgacgccgccccgcaggatcagatggccgccggcaagctgatgaagaagctcgaa
gcggaaatcgttcgcggcgccatcctcaaggacggcaagcgcatcgatggccgcaccacc
acgcagatccgcccgatcgaggcgatggtgcatttcctgccgcgcacccatggttcggcg
ctgttcacccgcggtgagacgcaggcgatctgcaccaccaccttgggcaccaaggaaagc
gagcagatgatcgacgggctgaccggcctgtcctacgaaaacttcatgctgcactataac
ttcccgccctattcggtcggtgaagtgggccgcttcggcgcccccggtcgtcgtgaagtc
ggtcatggcaagctcgcctggcgcgcgctgcacccggtgctgccgactaaggaagagttc
ccctacacgatccgcgttctgtcggacatcaccgagtcgaacggctcgtcgtcgatggcg
acggtgtgcggcggttcgctgtcgatgatggatgccggcgtgccgctgaagcgcccggtc
tcaggcatcgcgatgggcctgatcctggaaggcaaggatttcgcggtgatcagcgacatc
ctgggcgacgaggatcatctcggtgacatggacttcaaggtcgcgggcacgtccgagggc
atcaccacgatgcagatggacatcaagatcgcgggcatcaccgaagagatcatgcgcaag
gctttggcccaggccaaggaaggccgcgcgcacattctcgacgaaatggccaaggcgctc
gaccatacccgtgaggagttgtcggcacacgcaccgcgcatcgagacgatcacgatcgat
aaatcgaagattcgtgaagtcatcggcaccggcggcaaggtgatccgtgagatcgtcgcc
accaccggcgccaaggtcgatatcgacgacgagggcgtgatcaaggtgtcgtcgtccgac
accgcgcagatcgaagccgcgatcaagtggatcaagggcctggtcgaagaggccgaggtc
ggcaaagtctatgacggcaaggtcgtcaatttggtcgatttcggtgcgttcgtgaatttc
atgggcggcaaggatggcctcgtccatgtctccgaaattcgcaacgagcgcgtcgagaag
gtctcggacgtcctgagcgaaggccaggaagtcaaggtcaaggtcctcgagatagatccg
cgcggcaaggttcgcctgtcgatgcgcgtcgtcgatcaggaaaccggcgccgagctggaa
gacagccgcccggcacgcgaaccgcgcgaaggtggtgatcgtggtccgcgcggcccgcgc
cgtgatggcgatggtggccgtggccccagaggcgaaggccgcggcgatggcggcggccgt
ggcgacggcggcggccgtggtgaccgcggtccgcgccgtgacggcggtgacaggggcccg
cgtcgcgacggcggtggtgaccgtggtccgcgtcccgagcgttccggcggcaatgatgac
ggccctgcgcctgagttcgcaccggccttcctgaccggcgatcgcgactaa
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