Sphingomonas sp. So64.6b: G4G27_22840
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Entry
G4G27_22840 CDS
T11422
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
Organism
spso Sphingomonas sp. So64.6b
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA
Mg_chelatase
HTH_7
MCM
HTH_IclR
AAA_2
HTH_22
HTH_28
AAA_3
CENP-B_N
HTH_17
HTH_23
AAA_16
dnstrm_HI1420
Motif
Other DBs
NCBI-ProteinID:
QNA86502
LinkDB
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Position
complement(4807284..4808708)
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AA seq
474 aa
AA seq
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MTRNGQRLLMLIDDEPAQRRLVAALAARRGWRAVFAQDGEMAIAMLGTQDGMQLDAILLD
HWAPEADASALIAEIRERRPALPLLMLTANGSVAQAVGAMRAGATDFLVKPLAPERLLAA
LDAAVTGKTSGELRPLTEKIPALLAFDEIVGSAPDFRAALAIAAKAARARVAVLLEGESG
VGKEVVAEAVHAASPRGKKPMITVNCGAIPANLVESELFGHEKGAFTGAFERKIGRFQEA
DGGTLFLDEVGEMPIEAQVKLLRVLQSGEIQSIGARHTREVDVRVIAATNKRLIEEVEAG
RFREDLYYRLNVVQVTIPPLRERTGDIPALARHLLARIAQQPGLRPLGITDDALALLGQY
DWPGNVRQLQNALFRAAVLCDGAALTRADFPQIAALGAQRHTTPGPSPMATSGGVTLFHA
DGNLRALEEIEADVIRLAIGHYRGRMTEVARRLGIGRSTLYRKLGELGIDNAAA
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgcaacggacagcgcctgctgatgctgatcgacgacgaaccggcgcagcgccga
ctcgtcgccgcgcttgccgcgcgccgcggctggcgcgcggtgttcgcgcaggacggcgaa
atggcgatcgccatgctcggcacgcaggacggcatgcagctcgatgcgatcctgctcgac
cattgggcgcccgaggccgatgccagcgcgctgatcgccgagattcgcgagcgccgcccg
gcgctccccttgctcatgctcaccgccaacggatcggtcgcgcaagcggtcggtgcaatg
cgcgccggcgcgaccgatttcctggtcaagccgctcgccccggaacgcctgctcgccgcg
ctcgacgcggcggtgacgggcaagacatcgggcgaattgcgtccgctgaccgaaaagatc
ccggcgctgctcgcgttcgacgagatcgtcggctcggcgcccgatttccgcgctgcgctg
gcgatcgccgccaaggcggcacgggcgcgtgtcgcggtgctcctcgaaggtgaaagcggc
gtcggcaaggaagtcgtcgccgaagcggtccatgccgcctccccgcgcggcaagaagccg
atgatcacggtcaattgcggcgcgatccccgccaatctggtcgagagcgagctgttcggg
cacgagaaaggcgcctttaccggcgcgttcgaacgcaagatcggccgcttccaggaggcc
gatggcggaacattgttcctcgacgaagtcggcgagatgccgatcgaagctcaggtcaaa
ttgctccgcgtgctgcaatcgggcgagatccagtcgatcggcgcgcgccatacccgcgaa
gtcgatgtccgcgtcatcgccgcgaccaacaaaaggctgatcgaggaagtcgaggcgggc
cggttccgcgaggatctctattaccggctcaacgtcgtgcaggtgacaatcccgccgctt
cgcgaacgcaccggcgacatccccgcgctcgctcgccatctgctcgcgcggatcgcgcag
cagccggggcttcgcccgctcggcatcacggacgatgcgctggcgctgcttggccaatat
gactggccgggcaatgtccgccaattgcagaacgcgctgttccgcgccgccgtgctgtgc
gacggcgccgcgctgacccgcgccgatttcccgcagatcgcggcactcggcgcgcagcgc
cacaccacgccggggccatcgccgatggcgaccagcggcggcgtcaccctgttccatgcc
gacggcaatctgcgcgcgctggaggagatcgaggccgatgtcatccgcctcgccatcggc
cattatcgcggccgcatgaccgaggtcgcgcggcggctcgggatcgggcgctcgaccttg
tatcgcaagctcggtgaactcgggatcgacaacgccgcggcgtga
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