Sphingomonas sp. So64.6b: G4G27_23515
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Entry
G4G27_23515 CDS
T11422
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
spso Sphingomonas sp. So64.6b
Brite
KEGG Orthology (KO) [BR:
spso00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spso02000
]
G4G27_23515
Transporters [BR:
spso02000
]
Other transporters
Pores ion channels [TC:
1
]
G4G27_23515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Ulvan_lyase_C
Motif
Other DBs
NCBI-ProteinID:
QNA86613
LinkDB
All DBs
Position
complement(4958765..4960954)
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AA seq
729 aa
AA seq
DB search
MDRSTHFRLAATTALAAALFFSSAEQAQAADSNPVTQAPEAQATDSQVPSTSAEPVAEPA
EERAEGDIVVTAQRREEKLKDVPISITAVTGEQLTQSGVSGSRDLALLAPGLTINTTGAA
AQATVRGVGNTVVGGNSESPVAIYIDGVYISGQYFAVFDLANIESVQVLKGPQGTLFGRN
ATGGAILVTTTRPSDVFSGSVTASYANFDDFRIGGFISGPITENLSFDIAGNYHKDHGYA
RDVLRDTRLAEYEDKSIRGKLLFSPDSDTEVMLIGDYGRIRDETSVSLRPISNSATPGAL
IPKDPRELALTFDPYAITKGGGVSLSIMHDFGAVTVKSLTAYRKTENFSITDQDRVVAAS
SRIDTLIKDNYFTEEVTASSSNASPFQWIVGGFYYGDTVDNPTYSNVTTLLNNAHMQVDA
YAIFGEGTYALTDRLKVTAGVRYSTENRTFLSRRNAGTPLTAFRSLNVDAWTPRVSVIYA
LNDNSNVYATYSKGFKSGLFPAATFNAPPVEPETITSYEVGYKLAAGPTSLNLSAFYYDY
QDLQITTRNPAGLQTLLNAANAEIYGLDADFSIRLAQGLRVRLAGAYTHAKYKKFDYLVP
FFRELPAGGNTTYLGDASGKTMIRAPEFTGNAGIRYETAIGAGKVDASADYYYNSGFVWT
LDNDYRQRPYSLINAQLGWSPDGDHFRLSVFGRNLTNTLYSMGTSVTNAATAAAYARPRS
YGVAASFKF
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atggatcgttcgacgcattttcgtctggcagcgacgacggcacttgccgccgccttgttt
ttcagcagtgccgagcaggcgcaggctgcggattctaaccccgtgacccaagcgcctgag
gcccaggcaaccgacagtcaggtgccaagcacgtcagccgaaccggtcgcggagccggcg
gaagagcgggcggaaggcgacatcgtcgttaccgcgcagcgtcgcgaggagaagttgaag
gacgtcccgatctcgattaccgccgtcaccggcgaacagctgacgcaaagcggcgtttcc
ggctcgcgcgatctggcactgctcgcaccaggtctgacgatcaacacgaccggcgccgcg
gcgcaggcgaccgtgcgcggcgtcggcaacaccgtggtcggcggcaattcggaatcaccg
gtcgcgatctatatcgacggggtctatatctcgggccagtatttcgcggtgttcgacctg
gcgaacatcgaatccgtgcaagtgctcaagggcccacagggcacgctgttcggccgcaac
gccaccggcggcgcgatactcgtcacgaccacgcggccgagcgacgtgtttagcggcagt
gtcaccgctagctacgccaatttcgacgatttccgcatcggcggcttcatcagcgggccg
atcaccgagaatctcagcttcgatattgccggcaattaccacaaggatcacggctacgcc
cgcgacgttttgcgcgacacgcggctggccgaatatgaagacaagagcatccgcggcaag
ctgctcttctcgcccgacagcgacaccgaggtgatgctgatcggcgattatggccgcatt
cgcgacgagacgtccgtttcgctgcgcccaatctcgaactcggcgacaccgggcgcgttg
attccgaaagacccgcgcgagctggcgcttaccttcgatccctatgcgatcaccaagggc
ggcggcgtgagcctatcgattatgcatgatttcggcgccgtcaccgtcaagtcgctgaca
gcttatcgcaagaccgagaatttctcgatcaccgaccaggatcgggtggtcgccgcgtct
agtcgaatcgatacgctgatcaaggacaattacttcaccgaggaagtcaccgcatcgagc
tcgaacgccagcccgttccagtggatcgtcggtggcttctattacggcgatacggtcgac
aatccgacctattccaacgtcacgacgctgctcaacaatgcgcatatgcaggtcgatgct
tatgcgatcttcggcgaaggtacctacgcactgacagacaggctcaaggtcacggccggt
gtgcgttacagcacggagaaccgtaccttcttatcccgccgcaacgctggcacgccgctc
actgcgttccgcagtctgaacgtggacgcctggacaccgcgcgtgtcggtcatctatgcg
ctcaacgacaattcgaacgtctacgcgacctattcgaagggcttcaagagcggcctgttc
cccgccgcgaccttcaatgcgcccccggtcgagcccgaaacgatcacctcgtatgaggtg
ggctacaagctcgccgctggtccgacgagcttgaacctttctgcattctattacgactat
caagatctgcagataacgacgcgcaaccccgctggattgcaaaccttgctcaacgcggcg
aatgccgaaatctacggcctcgatgccgatttttcgatccgtctggcccagggactgcgc
gtacggctggccggcgcctacactcacgccaagtacaaaaagtttgattatctcgtgcct
ttcttcagggaacttccggctggcgggaacacgacgtatcttggtgatgccagcggcaag
acgatgatccgcgcgccggaattcacgggcaatgccggcatacgctacgaaaccgcgatc
ggggcgggtaaggtcgatgccagcgccgactattattataattccggctttgtctggacg
ttggacaatgattatcgccagcggccctattcgctgatcaacgcgcagcttggctggtcg
cccgacggcgatcatttccgcctttcggtgttcggccggaacctgaccaacacgctctat
tcgatgggcacatcggtcaccaatgcagcgaccgcggccgcctacgcccgtccgcgcagc
tacggcgtcgccgccagtttcaaattctga
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