Sphingomonas sp. So64.6b: G4G27_23850
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Entry
G4G27_23850 CDS
T11422
Name
(GenBank) DEAD/DEAH box helicase family protein
KO
K26273
protein strawberry notch
Organism
spso Sphingomonas sp. So64.6b
Brite
KEGG Orthology (KO) [BR:
spso00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
spso03036
]
G4G27_23850
Chromosome and associated proteins [BR:
spso03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
G4G27_23850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
ResIII
MTS
Motif
Other DBs
NCBI-ProteinID:
QNA86672
LinkDB
All DBs
Position
5040023..5044354
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AA seq
1443 aa
AA seq
DB search
MTIASASAAVPAAPFPLAASPAPAAILAAAHSLLPHLERGQRVDAATLRGAMEAALGASD
TSGAWNWKTAYEACEAATVLFLRKYGKAVMRKSGSPAASLPMLARIASLMPTHTRRAEET
QAFQQFSTPMPFGLAALTAAAITPADCVLEPSAGTGLLAVLAEIAGARLMLNELADTRAD
LLSSLFPAIPVTRFDAAQIDDHLEATAVPSVVLMNPPFSVMANVSGRMTEAAYRHVASAL
ARLADGGRLVTITGASFAPDAPAWRDAFARLQERGTVVFTAAIDGSVYAKHGTTIETRLT
VIDKTPADDPTVFPPSAGVAPDVATVLGWIETQVPARLPVTLPRTISAVSAPRTVRGYLA
RAASSPARTIAEPEGVELAYETVDWTPPEGGRLTDAIYEEYGLQAIRIPGAQAHPTKLVQ
SAAMASVAPPKPSYRPMLPASIVIDGILSDAQLETVIYAGDAHGEFLAGSWTVDETFDLV
SAAPDDAQNAVRFRRGFMLGDGTGAGKGRQSAGIILDNWMRGRRKAVWISKSEKLLEDAQ
RDWSALGMERLLVTPLSRFPQGKPITLGQGVLFTTYATLRSDDRGEKLSRVKQIVEWLGS
DFDGVIIFDESHAMQNAAGGKGERGDVAASQQGRAGLRLQHALPNARVVYVSATGATTVH
NLAYAQRLGLWGGEDFPFATRAEFVEAIEDGGVAAMEVLARDLRSLGLYTSRSLSYDGVE
YELVEHQLTPEQTRIYDAYAGAFAIIHKNLDAAMQAANITGDTGTLNRQAKSAARSAFES
AKQRFFGHLLTSMKTPTLIRSIDQDLADGHAAVIQIVSTGEALMQRRLAEIPTEEWNDVR
VDITPREYVLDYLAHSFPVQLYEPFTDSEGNLSSRPVYRDGQPVESREAVARRDSLIETL
ASLPPVPGALDQIVQRFGTDIVAEVTGRSRRIVRKSRADGRGDRLAVENRAASANLAETS
AFMDDLKRILVFSDAGGTGRSYHADLSARNQRLRVHYLLEPGWKADAAIQGLGRTNRTNQ
QQPPLFRPIATNVKAEKRFLSTIARRLDTLGAITKGQRQTGGQGLFRPEDNLESHYARDA
LRQLYLLLVRGKVEGCSLQMFEDATGLSLMDSGGIKDELPPITTFLNRLLALTISLQGIL
FTAFEQLLNAKIEGAIASGVYDLGLETLQAESFIVTDRTTIHVHPGTGAETQLLRIMRRE
RNRPTSLDGAFGLVGDRQAKLLVNGRSGRAAVQIPASSIMLDDGEIERRVALIRPMEQHH
ATLRSMDESHWQEAERNSFVEAWTAEMAEVPEFSDSTIHIVAGLLLPIWKRLPNESTRVY
RLQTDPGERIIGRRVSPAWVAGALATGANTLTPDDAFKALIDGRTILDIAEGMQLRRVRV
MSANRIELSGFTDAMRDRLRAYGLFSEIISWKLRFFVPTDATGPTILTKVLERYAIERVS
EAA
NT seq
4332 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcgcttccgcatccgcggccgttccggctgcgccgtttccgcttgccgcgagc
ccggcaccggccgccatcctcgccgccgcccacagccttctcccccatctcgaacgcggc
cagcgcgtcgatgccgcaaccttgcgcggcgcgatggaggcagctctcggcgcctccgac
acgtccggcgcctggaactggaagacggcctacgaggcctgcgaagcggcaacggtgctg
tttctgcgcaaatacggaaaggcggttatgcgcaagtccgggtctccggctgccagcctg
cccatgctggccaggatcgcgagcctgatgccgacgcatacgcggcgcgcggaggagacg
caggccttccagcagttctcgacgccgatgccgttcggtctcgctgcgctcacagcggct
gcgatcacgcccgccgactgcgtgctggagccctcggccgggaccgggctgctcgccgtc
ctggccgagattgccggggcgaggctgatgctcaacgagctggcagacacgcgcgcagac
cttctgtcctccctcttcccggccattcccgtcactcgcttcgacgccgcccagatcgac
gatcacctcgaagcgaccgcggtgccgagcgtcgtgttgatgaatccgccgttctcggtg
atggcgaacgtctccggccgcatgactgaggccgcctatcgccacgtcgcctcagcgctg
gcgcgtctggcggatggtggacggctcgtgacgatcacgggcgccagcttcgcgccggac
gcaccggcctggcgcgacgcgtttgcccggctgcaggagcgcggcactgttgtgttcacc
gcagcgatcgacggctcggtttatgccaagcacggtacgacgatcgagacacgcctgacg
gtgatcgacaagacgcccgccgacgatcccaccgtgttcccgccatcggccggggtcgcg
cccgatgtcgcgacggtgctcggatggatcgaaacccaggtgccggcaaggctcccggtc
acactgccgcggacgatatctgccgtctcggcgcctcgcaccgtgcgcggttatctcgct
cgcgccgcgtcgtcgccggcccgcaccatcgccgaacccgaaggcgtcgaactcgcctat
gaaaccgtcgactggaccccgcccgagggtggccggctgaccgatgccatctatgaggaa
tacgggcttcaggcgatccgtattcccggcgctcaggcgcacccgaccaagctggtccag
tccgctgctatggcctcggtcgcaccgccgaagccgagctaccggccgatgctccccgcc
agcatcgtcatcgacggcatcctgtccgacgcccagctcgaaacggtgatctatgccggc
gacgcccatggcgaattcctcgcaggctcatggaccgtggatgagaccttcgacctcgtc
tcggccgcgcccgacgatgcccagaacgccgtccgctttcgccgcggcttcatgctcggc
gacggcaccggcgccggcaaaggccgccaatcggccggcatcatcctcgacaactggatg
cgcggacgtcgcaaggcggtctggatttccaaatccgaaaagctgctggaagacgcgcag
cgcgactggtcggcgctcggcatggaacgcctgctggtaacgccgctgtcgcgcttcccg
cagggcaagccgatcacgctcggccaaggcgtcctattcaccacctatgccacgctacga
tccgacgatcgtggcgagaagctttcgcgcgtcaagcagatcgtcgaatggttgggctcc
gatttcgatggagtgatcatcttcgacgagagccacgccatgcagaacgccgctggcggc
aagggcgaacgcggtgacgtcgccgcctcgcaacagggccgtgccggcctgcggctccag
cacgctttgccgaacgcgcgcgtcgtgtacgtttcggcgaccggcgccacgacggtccac
aatcttgcctatgcgcagcggctcggcctctggggcggcgaggatttccccttcgccacg
cgggccgaattcgtggaagccatcgaggacggcggcgttgcggcaatggaagtgctggcc
cgcgacctgcgctcgctcggcctctacacctctcgctcgctctcctatgacggcgtcgaa
tatgaactggtcgagcaccagctcacgcccgagcagacgcgcatctacgatgcctatgcc
ggggcgttcgcaatcatccacaagaatctcgacgccgcgatgcaggccgccaacatcact
ggcgacaccggcacgctgaaccggcaggccaagtccgccgcccgctcggcctttgagagc
gccaagcagcgtttcttcggccatctcctcaccagcatgaagacgccgaccctgatccgc
tcgatcgatcaggacctggccgatggccatgccgccgtgatccagatcgtctccaccggc
gaggcgctgatgcaacgccgcctggccgagatcccgaccgaggaatggaacgacgtccgc
gtcgacatcacgccgagggaatatgtcctcgattacctcgctcattccttcccggtgcag
ctctacgagccgttcaccgatagcgagggcaatctgtcgtcgcgcccggtctatcgcgat
ggccagcccgtcgaaagccgcgaggctgtcgcacgccgtgacagcctgatcgagacgctg
gccagcctgccgccggtccccggcgcgctcgaccagatcgtccagcgcttcggcacggac
atcgtcgcggaagtcaccggccgatcgcggcggatcgtccgcaagtcgcgtgccgacggc
aggggcgatcgcctcgccgtcgagaaccgcgccgcttccgccaatctggcggaaacctcc
gccttcatggacgacctgaagcgcatcctcgtcttctcggatgctggcggcacgggccgc
agctatcacgccgacctgtcggcgcggaaccagcggctgcgcgtccactatctcctcgaa
ccgggctggaaagccgatgctgcgatccagggcctcggtcgcaccaatcgcacaaaccag
cagcaaccgccgctgttccggccgatcgcgaccaacgtcaaggccgagaagcgcttcctc
tccaccatcgcccgtcggctcgacaccctcggcgccatcaccaagggccagcgccagacc
ggcggccagggcctgttcaggcccgaggacaatctggagagccactatgcccgcgacgca
ctgcgccagctctacctgttgctggtccggggcaaggtcgagggctgctcactgcagatg
ttcgaggatgcaaccggcctgtcgctgatggattcgggcggcatcaaggatgagctgccg
ccgatcacaaccttcctcaaccggttgctggcgctgaccatctcgctacagggcatcctg
ttcacggcgttcgaacaacttctcaacgccaagattgagggcgccatcgccagcggcgtc
tatgacctcgggctggagacgctccaggccgagagcttcatcgtcaccgaccggacgacc
atccatgtccatccgggcaccggcgccgagacgcagttgctcaggatcatgcggcgcgaa
cgcaaccggcccacctcactcgacggcgcgttcggtcttgtcggcgaccgccaagcaaag
ctattggtcaacggccgctccggccgagctgccgtacaaattccggcatcgtccatcatg
ctcgacgacggcgagatcgagcgtcgcgtcgcgctgatccgcccgatggaacagcaccac
gccaccctgcgctcgatggacgagagccattggcaggaagccgaacggaacagctttgtg
gaggcttggaccgccgagatggcggaagtgccggaattctccgacagcacgatccatatc
gtcgccgggcttctcctgccgatctggaagcgtctgccgaacgaatcgacccgggtttac
cggctccagaccgacccgggcgaacgcatcattggccgccgcgtatcgccggcctgggtc
gcgggcgcattggcgacgggcgcaaatacgctgacgccggacgacgcgttcaaggcgttg
atagacggccgcacaatcctcgacatcgccgagggcatgcagcttcgccgtgttcgcgtc
atgagcgccaaccgcatcgaactctcgggcttcaccgacgcgatgcgtgaccgccttcgc
gcctatggcctgttcagcgagatcatatcgtggaagctgcgcttcttcgtgccgaccgac
gctaccggtcccacgatcctcaccaaggtgctggagcgctacgcgatcgagcgcgtcagt
gaggccgcatga
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integrated database retrieval system
