Shewanella psychromarinicola: EGC80_00190
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Entry
EGC80_00190 CDS
T09848
Name
(GenBank) AraC family transcriptional regulator
Organism
spsr
Shewanella psychromarinicola
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Gene cluster
GFIT
Motif
Pfam:
Arabinose_bd
HTH_18
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
AZG33503
UniProt:
A0A3N4DPL2
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Position
45847..46860
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AA seq
337 aa
AA seq
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MQPLPIFYLNQVYQQLSLWECNVNIWLRHNGITLEQLQDPYYQVSFDDYQRLINSAINLS
ARPDLGLHVGNRISINTHGMMGFAMLNSSTLKQAIDTLKQFINTRTPLVRVNIHETADTM
VITFQEVQPLGVIQQPFMDALLVTIAKLLQQLSPHSPALCQINLSFPAPTYWQQYSALTK
VPVHFNQASTQFILTQTLLTQRLEMADPSSFMQARQWCINELDLLNGQQSLSDKLYQYLL
PSPMPLPSLSDTAAHFHMTPRTLHRHLAQQQSSYKTIVASVNHHIAKHYLSQSQGSIKQL
AYQLGYVDVTNFRRAFKRWQGMTPSEYRQQQKTGSEI
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgcagccactgccaattttttacttaaaccaagtttatcaacaactaagcctgtgggaa
tgtaatgttaacatttggctgaggcataacggcatcacacttgagcaattacaagacccg
tactatcaagtgagttttgatgattatcaacggctaataaactctgcaatcaatctttcg
gccagaccagacctaggtttacatgtcggcaatcgaataagcattaacactcatggcatg
atgggttttgccatgcttaacagcagcacgcttaaacaagccattgatacattgaagcag
tttattaacacccgcacgccgctggttagggtaaatatccacgaaacggccgacaccatg
gtcataacattccaagaagtacaaccactaggcgtaatacaacaaccgtttatggatgca
ctcttggtgactattgctaagttgctgcaacaactcagtccgcactctccggcgttatgt
cagattaatctgagcttccctgcgccaacttattggcagcaatattcggcattaactaag
gtgccagttcattttaaccaagctagcacccagtttatattaacccaaacattgttaacc
caacgccttgagatggccgatcccagctcatttatgcaagccagacaatggtgcattaac
gaactcgatctacttaacggacagcagagtttgagtgataagctgtatcagtatttattg
ccaagcccgatgccattacccagtttgagtgacaccgcagcgcattttcacatgacacca
cgcaccctgcatcgccatttagctcaacagcaaagtagctataaaactattgtggcgtcg
gtgaaccatcacattgctaagcattatttatcgcaatctcaaggcagcattaaacaactg
gcatatcaattaggttatgtggatgtgactaattttcggcgggcatttaagcgctggcaa
ggcatgaccccaagtgaataccgccagcagcaaaagacaggatccgaaatatga
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