Shewanella psychromarinicola: EGC80_00385
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Entry
EGC80_00385 CDS
T09848
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
spsr
Shewanella psychromarinicola
Brite
KEGG Orthology (KO) [BR:
spsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spsr03400
]
EGC80_00385
Enzymes [BR:
spsr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
EGC80_00385
DNA repair and recombination proteins [BR:
spsr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
EGC80_00385
Prokaryotic type
EGC80_00385
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AZG33537
UniProt:
A0A3N4DIE6
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All DBs
Position
97381..98949
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AA seq
522 aa
AA seq
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MVNTAKHAINIVWFKRDLRLSDHQPLVDAFNHHLPCLLIYNFEPFMLADSHYNERHWRFV
WQSLQDINQQLARFNGQVYTFNVPIIDLLNELSQQFEIKDIFSHQEIGLHNSFERDKAVA
RWCHQQQVNWQQSPTGAVVRGRKHRKQWDQHWQQVMNSPIAIPNWQLCLLQKLDNYQNPL
IDQAIMIHNDQFQTGGPKAARAVLNSFLGHRGKDYQRSISSPSLSRIHCSRLSPYLAWGN
ISLRQVYQATLTRYNQVQSQNGDNPINSNNRGWRKSLLAMMSRLHWHCHFMQKFESQCSM
EFTPVNPGYLEYPYRTDDKVQQDIQRWAEGQTGIPIIDACMRALQHTGYINFRMRAMLVS
FVTHHLNITWQHASLPLANYFLDFEPGIHYPQLQMQASVTGINTIRLYNPIKQSQDQDPR
GDFIRQWCPELTNLPNEYIHQPWLQPPMEAIFNDVILGRDYPEPMIDLTLAAQAARDRLW
SYREQPQVQRHIGAVLSRHVSPKRKRTKNKAAELKVQAKRPS
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggtcaataccgccaaacacgctattaatatcgtctggtttaaacgcgatttgcgcttg
tctgatcatcagccgctcgtcgatgcgtttaaccatcatctaccctgcttgctgatttat
aactttgagccatttatgctggctgactcgcattataatgagcgtcattggcgctttgtg
tggcagtcgctacaagacataaatcaacaactggcgcggtttaatggtcaggtatatacc
ttcaatgtgccaataattgatttgttgaatgaattatctcaacagtttgaaattaaagat
atttttagtcatcaagagattggtctacacaacagctttgagcgcgataaagcggttgcc
cgctggtgtcatcagcagcaagttaattggcagcagtcacctactggcgcggtagtgcgt
ggccgaaaacaccgcaaacagtgggaccaacactggcaacaagttatgaacagtcctatt
gctatccccaattggcaattatgtctgctacaaaagctcgataactatcaaaatccgctt
atcgaccaagccatcatgatacacaatgatcagtttcaaacgggtggtcctaaagcggcc
agagctgtcttgaacagctttttaggccatcgcggtaaagactatcaacgcagtatttct
agccccagtttgagccgtatccattgctcacgtttatcgccttatttggcttggggcaac
atcagtcttcggcaagtttaccaagccacattaactcgttataaccaagtgcagagccaa
aacggtgataacccaataaatagtaataaccgaggttggcgaaagtcattgctggcgatg
atgtcgcgcttacactggcattgccattttatgcagaaatttgaaagccaatgcagcatg
gaatttaccccggtaaaccctgggtatctagagtatccctaccgtacagacgacaaagta
cagcaagatattcagcgctgggccgaaggtcaaacggggatcccaattatcgatgcctgc
atgcgcgctttacagcacaccggttacattaattttagaatgcgcgccatgttagtcagc
tttgtgactcatcatttaaacattacgtggcaacatgccagcttaccgttagccaattat
tttctcgatttcgaacctgggatccattacccgcaactgcaaatgcaagcctcggtcaca
ggcattaataccatacgcttatacaatccaatcaagcagtcacaagaccaagatccccgt
ggggattttattcgccagtggtgtccagagcttaccaacttacccaatgagtatattcat
caaccttggctacagccgccgatggaagctatttttaatgatgtaattttaggccgtgat
tacccagagcctatgatagatttaaccctagccgctcaagctgcgcgcgatcgcttatgg
tcataccgtgaacaacctcaagttcaacggcatatcggcgcagtattaagccgtcacgtt
agccctaaacgcaaacgtaccaagaacaaggccgcagaactaaaggtacaggcaaaaaga
ccgtcatga
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