Shewanella psychromarinicola: EGC80_01305
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Entry
EGC80_01305 CDS
T09848
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
spsr
Shewanella psychromarinicola
Pathway
spsr00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
spsr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
EGC80_01305 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
spsr01007
]
EGC80_01305 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spsr03016
]
EGC80_01305 (lysS)
Enzymes [BR:
spsr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
EGC80_01305 (lysS)
Amino acid related enzymes [BR:
spsr01007
]
Aminoacyl-tRNA synthetase
Class II (A)
EGC80_01305 (lysS)
Transfer RNA biogenesis [BR:
spsr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
EGC80_01305 (lysS)
Prokaryotic type
Other AARSs
EGC80_01305 (lysS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
AZG33695
UniProt:
A0A3N4DLL7
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All DBs
Position
complement(313322..314824)
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AA seq
500 aa
AA seq
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MTEHVQDENKLIAERRAKLDHIRTSCPANAHPNTWQRSHKAAELQAQYGEQTKEALEVLG
FQTSIAGRVMAKRGPFLVIQDVSGRIQAYAGKPVQGDLKERYQGLDIGDIIGVKGQLHLS
GRGDLYVNMEEYQLLTKALRPLPEKFHGLTDQETRYRQRYVDLIVNEESRNTFIMRSKVV
SAIRHFMVKKEFMEVETPMMHVIPGGATARPFVTHHNALDMAMYLRIAPELYLKRLVVGG
FERVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADYKDLMDLTEEMLSSIAIDLLGSAQM
PYGEDTVDFGGPYARLSMLEAIQKYNPDNATIQAMTYEQVKDVDFMRDLAKSLGIKLEKF
WTCGQLLEEIFGETAETKLMQPTFITGYPADISPLARRNDNNDFITDRFEFFIGGREVAN
GFSELNDAEDQDSRFKAQVDAKDAGDDEAMFYDADYITALEHGLPPTAGQGIGIDRLVML
FTNTHTIRDVILFPAMRPQA
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgactgaacacgtacaagatgaaaacaaactgattgctgaacgtcgcgctaaattagac
cacatccgcaccagttgtcctgctaatgctcatccaaatacctggcaacgtagccataaa
gcggctgagttacaggcgcaatatggtgagcagaccaaagaagcgctagaagtgttaggg
tttcaaaccagtattgccggccgtgttatggcaaaacgaggtccatttttagtcattcaa
gacgtgtctggtcgtattcaagcttacgctggtaagccagtgcaaggtgatttaaaagag
cgttatcaaggtttagacatcggtgacatcattggtgttaaaggtcagctgcatttatcg
ggccggggcgacttgtacgttaatatggaagaatatcagttactgactaaagcattacgt
ccgttacctgaaaagttccacgggttaaccgaccaagaaacgcgctatcgtcagcgttac
gttgatttaatcgttaatgaagagtctcgcaatacctttattatgcgttctaaagtggtt
tccgctattcgtcactttatggtcaaaaaagagttcatggaagttgaaactcctatgatg
cacgttattcctggtggtgctactgcacgtccatttgtcactcatcacaacgcgttagac
atggccatgtacttacgtattgcgccagaactgtatttaaagcggttagtggttggtggt
tttgagcgtgtgttcgaaattaaccgtaacttccgtaacgaaggtttatcgccacgtcat
aacccagaattcaccatgatggaattctatatggcgtacgcggattataaagacctaatg
gatttaactgaagaaatgctcagttcaattgcgattgatttactcggtagtgcgcaaatg
ccatacggcgaggacacagtagactttggtggtccttatgcccgtttaagcatgttagaa
gccattcagaaatacaatcctgataacgccactatacaagcgatgacgtacgagcaagtt
aaagacgtagactttatgcgcgacttggccaagagcctaggcatcaagctagaaaaattc
tggacttgtggccagttgctggaagaaatttttggtgaaaccgctgaaactaaactgatg
caacctactttcattactggctatcccgcggatatttcgcctttagcacgtcgtaatgat
aacaatgatttcatcaccgaccgttttgaattctttatcggtggccgtgaagtggctaac
ggcttctctgagctcaatgatgctgaagatcaagacagccgctttaaagcgcaagttgat
gccaaagatgccggcgatgacgaagccatgttctacgatgcagactacatcactgcactc
gagcacggtttaccgccaaccgcgggtcaaggtattggtatcgaccgtttggtgatgcta
ttcactaacacgcatactatccgtgatgtgattttattcccagcgatgcgcccacaagct
taa
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