Shewanella psychromarinicola: EGC80_02070
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Entry
EGC80_02070 CDS
T09848
Name
(GenBank) DNA-binding transcriptional regulator Fis
KO
K03557
Fis family transcriptional regulator, factor for inversion stimulation protein
Organism
spsr
Shewanella psychromarinicola
Brite
KEGG Orthology (KO) [BR:
spsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spsr03000
]
EGC80_02070
03036 Chromosome and associated proteins [BR:
spsr03036
]
EGC80_02070
03400 DNA repair and recombination proteins [BR:
spsr03400
]
EGC80_02070
Transcription factors [BR:
spsr03000
]
Prokaryotic type
Helix-turn-helix
Other families
EGC80_02070
Chromosome and associated proteins [BR:
spsr03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
EGC80_02070
DNA repair and recombination proteins [BR:
spsr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
EGC80_02070
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_8
Fis_N
DCAF17
HTH_30
Phage_NinH
HTH_28
UBL
Xre-like-HTH
Motif
Other DBs
NCBI-ProteinID:
AZG33832
UniProt:
A0A3N4DDA9
LinkDB
All DBs
Position
497040..497345
Genome browser
AA seq
101 aa
AA seq
DB search
MFDQTTNTEVHQLTVGKIETANGTIKPQLLRDAVKRAVTNFFSQLDGQEASEVYEMVLCE
VEAPLLDIIMQHTRGNQTRAANMLGINRGTLRKKLKKYGMN
NT seq
306 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatcagacaactaacacagaagttcaccagcttaccgtaggcaaaatcgaaaca
gcaaacggcactatcaagccgcagttattacgtgacgcagttaaacgtgccgtaactaac
ttcttctcacagttagacggtcaggaagcttctgaagtatatgaaatggtattgtgcgaa
gttgaagcgcctttactagacatcatcatgcaacacactcgtggcaaccaaacgcgcgct
gctaatatgttaggtatcaaccgtggtactttacgtaagaaattaaagaaatatggcatg
aactaa
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