Shewanella psychromarinicola: EGC80_02470
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Entry
EGC80_02470 CDS
T09848
Symbol
rsmI
Name
(GenBank) 16S rRNA (cytidine(1402)-2'-O)-methyltransferase
KO
K07056
16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:
2.1.1.198
]
Organism
spsr
Shewanella psychromarinicola
Brite
KEGG Orthology (KO) [BR:
spsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spsr03009
]
EGC80_02470 (rsmI)
Enzymes [BR:
spsr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.198 16S rRNA (cytidine1402-2'-O)-methyltransferase
EGC80_02470 (rsmI)
Ribosome biogenesis [BR:
spsr03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
EGC80_02470 (rsmI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TP_methylase
RsmI_C
Motif
Other DBs
NCBI-ProteinID:
AZG33900
UniProt:
A0A3N4E412
LinkDB
All DBs
Position
complement(600207..601049)
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AA seq
280 aa
AA seq
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MDQMVALYIVPTPIGNFGDISARALEVLQQVDLIACEDTRHSGKLLSHFGIETRKTALHD
HNERDRVQWIVEQLDAGKSIALISDAGTPLISDPGYHLVNYVRKAGHRVVPLPGACAAIT
ALSASGLPSDRFSFEGFLPSKEKARIDKLEFLKEDPRTLIFYESPHRILYSLAAIIEVLG
ADRQIVMAREVTKIFETFLSGTAAEVLAIVEADKNQQKGEIVIMCHGFSLSDEEGVPAVA
VTTLKLLCEELPLKKAAAIAAQIHGLKKNALYKYGLELDL
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atggaccaaatggtcgcgctgtatattgttcccacccctattggtaattttggcgacatc
agcgctcgtgcattagaggtgctgcaacaggtagatttaatcgcctgtgaagacactcgc
cacagcggaaagctgctgagtcactttggtattgaaacccgtaaaacggcactacatgat
cacaatgaacgtgaccgagtgcaatggatagttgaacaattagatgcgggcaagtcaata
gcactcatttctgacgctggcacaccgctcatttcagaccccggctaccatttggttaat
tatgtccgcaaagcgggccaccgagtggtgcctttaccgggtgcttgtgccgcgattacg
gccttgagtgcatcgggattaccgtcggatcgattcagttttgaggggttcttaccgtca
aaagaaaaagcccgtatcgataaacttgaatttcttaaagaagatcctcgtacactcata
ttttacgaatctcctcatcgtattctgtatagccttgccgcgattattgaagtgttaggc
gccgatagacaaatcgtgatggcgcgtgaagtcactaaaattttcgaaacctttttatct
ggcaccgctgctgaagttttggcgatagttgaagccgataaaaatcaacagaaaggcgaa
attgtcatcatgtgtcacggcttctcattatctgatgaagaaggtgttccagcggtcgcg
gtcactacgttaaagctactctgtgaagaattaccgcttaaaaaggccgcggctatagcg
gcgcaaatacacggtttaaagaaaaatgctttgtataaatacggtttagagctcgattta
taa
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