Shewanella psychromarinicola: EGC80_03900
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Entry
EGC80_03900 CDS
T09848
Symbol
slmA
Name
(GenBank) nucleoid occlusion factor SlmA
KO
K05501
TetR/AcrR family transcriptional regulator
Organism
spsr
Shewanella psychromarinicola
Brite
KEGG Orthology (KO) [BR:
spsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spsr03000
]
EGC80_03900 (slmA)
03036 Chromosome and associated proteins [BR:
spsr03036
]
EGC80_03900 (slmA)
Transcription factors [BR:
spsr03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
EGC80_03900 (slmA)
Chromosome and associated proteins [BR:
spsr03036
]
Prokaryotic type
Chromosome partitioning proteins
Inhibitors of FtsZ assembly
EGC80_03900 (slmA)
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GFIT
Motif
Pfam:
SlmA-like_C
TetR_N
HTH_11
HTH_AsnC-type
HTH_20
DUF6262
Motif
Other DBs
NCBI-ProteinID:
AZG34150
UniProt:
A0A3N4E688
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All DBs
Position
922818..923411
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AA seq
197 aa
AA seq
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MAESPKMNRREHILQCLAKMLESSPGQRITTAKLAAEVGVSEAALYRHFPSKARMFEGLI
EFIEDAILSRLNIIMDEEKDTMARCQLVLQLLLVFSERNPGISRVLNGDALLGENERLRS
RIDVLFAKIETQIKQILREKTLREGVGFNLDEAVLANLLLAFVEGRISQFVRSEFKQKPT
LHFDEQWTFIQQQLLRS
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaagccctaaaatgaatcgtcgtgagcatattttacaatgcttagcaaaaatg
ctcgaaagcagcccaggccaacgtattaccacagctaaacttgctgccgaagtcggtgta
tcagaagcggcactgtatcgtcatttccccagtaaagcgcgaatgttcgaaggcttaatc
gagtttattgaagacgctattttgtcacgcctcaatatcatcatggacgaagaaaaagac
accatggcccgctgccaattggtactgcagctgttattggtgttttctgaacgtaatcct
ggtatttcacgcgtattaaatggcgatgctctgctgggtgaaaacgaacgtttacgtagc
cgaatcgatgtgctatttgccaaaattgaaacccaaataaaacaaattctgcgcgaaaaa
actttacgcgaaggcgtaggctttaacctcgacgaagccgttctcgccaacctattactg
gcctttgtagaagggcgtatttcacagtttgttcgcagcgaatttaaacaaaaaccaacg
ctccactttgatgagcaatggacctttattcagcagcaattattaagaagttaa
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