Shewanella psychromarinicola: EGC80_04370
Help
Entry
EGC80_04370 CDS
T09848
Name
(GenBank) 3-deoxy-D-manno-octulosonic acid transferase
KO
K02527
3-deoxy-D-manno-octulosonic-acid transferase [EC:
2.4.99.12
2.4.99.13
2.4.99.14
2.4.99.15
]
Organism
spsr
Shewanella psychromarinicola
Pathway
spsr00540
Lipopolysaccharide biosynthesis
spsr01100
Metabolic pathways
Module
spsr_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
spsr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
EGC80_04370
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
spsr01005
]
EGC80_04370
Enzymes [BR:
spsr01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.12 lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
EGC80_04370
2.4.99.13 (Kdo)-lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
EGC80_04370
2.4.99.14 (Kdo)2-lipid IVA (2-8) 3-deoxy-D-manno-octulosonic acid transferase
EGC80_04370
2.4.99.15 (Kdo)3-lipid IVA (2-4) 3-deoxy-D-manno-octulosonic acid transferase
EGC80_04370
Lipopolysaccharide biosynthesis proteins [BR:
spsr01005
]
Lipid A
EGC80_04370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_N
PPDFL
Glycos_transf_1
Motif
Other DBs
NCBI-ProteinID:
AZG34230
UniProt:
A0A3N4E588
LinkDB
All DBs
Position
complement(1034138..1035400)
Genome browser
AA seq
420 aa
AA seq
DB search
MNRIVYSFFLYLFFPLVIVYLAFRAIKSVDYRSRWSERFGFANVTQTDVLIHCVSMGETL
AAIPLIKQLMAAHSQYSFTVTTTSPTGSAEVKKAFGDKVQHCYLPFDFSYAIKGFLRQLQ
PKVCIIMETELWPNLVHFAHRQQVTLILANARLSQKSADKYANKRRLAVPMLNKLNLITV
QTQREADRFIHLGVDIQRIHVCGSLKFDLTIDPTKKHQANTLRAQWDRLNSPIWVAGSVH
PGEFEAVLTAHKQLLIVFPEALLIMAPRHPEQFNLAAITVTQSGLTLARRSMNDEVNSQT
QVLLGDTMGELVMLYGAADQAFIGGTLINSGGHNPLEPAAMGLPVYVGPNHWDFAQITQL
LADAGALTCITSADELAQGLQHKFTDSQMYHAASSAALAVVEQNRGALLKQFTLINKLIV
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgtattgtttattctttctttctctatttgttttttccgctggtgattgtctat
ctagcatttcgggcgataaaaagtgtcgactatcggagtcgttggtctgaacgctttggt
tttgccaatgtcactcaaaccgatgtgctgatccactgtgtctctatgggagagactttg
gcggctattccgttaattaagcagcttatggctgcgcattctcagtattcgtttaccgtt
acaacaaccagtcctaccggatcggctgaagtgaaaaaagcctttggtgataaggtgcag
cattgttacttaccgtttgatttttcctatgccatcaaaggttttttacgccaattacaa
cccaaagtgtgcattattatggagaccgagctgtggcctaacttggtccattttgcgcac
cggcaacaagtgacattgattttggccaatgctcgactgtcgcaaaagtcagccgataaa
tacgcgaataagcgtcgtttagctgtgcctatgttaaacaaactcaacttgattaccgta
caaactcaacgtgaagccgatcggtttatacatttgggcgtggacattcaacgcatacat
gtgtgtggcagtttaaagtttgatctcactattgacccgacaaaaaaacaccaagcaaat
acgcttcgtgcccagtgggatcggctgaattcaccgatttgggttgctgggagtgttcat
cctggtgagtttgaggcggttttgactgcccataagcagctattaattgttttccctgag
gcattattgattatggcgccacgacacccagaacaatttaatttagccgctattaccgta
acccagtctggattgacgttagccagacgcagtatgaatgatgaggtgaatagccagact
caagtattgctgggcgataccatgggtgagttggtgatgttatatggtgcggcagatcaa
gcgtttattggcggcacattaattaatagcggtggccataatccgcttgaaccagcggcc
atgggattacctgtttatgttggccctaatcattgggactttgctcaaatcacccaattg
cttgctgacgccggagcattaacctgcattacctctgcagatgaattagcgcaagggtta
caacataaatttaccgatagccagatgtatcacgcagcatcctcggcggctctcgctgtg
gtggaacaaaatcgtggtgcgttattgaagcaatttacgctaatcaataagctcatcgtt
tag
DBGET
integrated database retrieval system
