Shewanella psychromarinicola: EGC80_04625
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Entry
EGC80_04625 CDS
T09848
Name
(GenBank) TetR/AcrR family transcriptional regulator
KO
K16137
TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
Organism
spsr
Shewanella psychromarinicola
Brite
KEGG Orthology (KO) [BR:
spsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spsr03000
]
EGC80_04625
Transcription factors [BR:
spsr03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
EGC80_04625
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Ortholog
Paralog
GFIT
Motif
Pfam:
TetR_C_13
TetR_N
TetR_C_13_2
TetR_C_4
TetR_C_11
TetR_C_10
TetR_C_6
TetR_C_43
Motif
Other DBs
NCBI-ProteinID:
AZG34280
UniProt:
A0A3N4E5L5
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All DBs
Position
complement(1093482..1094132)
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AA seq
216 aa
AA seq
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MFRKNVDDWSILVYSVTKMGGPMNKNITSKQSICAVGEKLFALHGYSGVGIKLILDEVGI
PKGSFYHYFASKEAFAAAVAEHYFQQRIQPIAIDPSANFKANLSTLLNGYHQLIDELFSG
HQPRGCVIGNLMVEVSPQSPLLHQTLTHLYDKWLGLLSALIQQGQQQGHIRADLSASILA
SVFWSNWQGTMLRSQIKADKIATKRALVQCMQMMTR
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgcaaaaatgtagacgactggtctattcttgtttattctgtcactaaaatggga
ggccctatgaacaaaaatatcaccagtaaacagtcgatttgtgccgtaggcgaaaagctt
tttgctttgcatggatacagtggcgtaggcattaaattgatcctcgatgaagtcggcatt
cctaaaggttctttttaccattattttgccagtaaagaagcgtttgcagctgccgttgcc
gaacattatttccaacaacgcattcaacccattgcgattgatcctagtgcgaattttaaa
gccaatttatcgacgctattgaatggctatcatcaactcattgatgagctttttagtggt
catcagcctcgcggctgtgttatcggtaacttgatggttgaggtgagtccacaatcacca
ttattgcatcaaacattgactcatctttacgataaatggttaggtttattgagtgcactt
attcaacaaggtcaacaacaagggcatattcgtgccgacttatcggcatcaatattagcg
agtgttttttggtcaaactggcaaggaactatgctacgctcacaaattaaagcggataaa
atagcgactaaacgggctttagtgcagtgcatgcaaatgatgactcgttaa
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