KEGG   Shewanella psychromarinicola: EGC80_04925
Entry
EGC80_04925       CDS       T09848                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
spsr  Shewanella psychromarinicola
Pathway
spsr03030  DNA replication
spsr03430  Mismatch repair
spsr03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:spsr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    EGC80_04925
   03430 Mismatch repair
    EGC80_04925
   03440 Homologous recombination
    EGC80_04925
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:spsr03032]
    EGC80_04925
   03400 DNA repair and recombination proteins [BR:spsr03400]
    EGC80_04925
Enzymes [BR:spsr01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     EGC80_04925
DNA replication proteins [BR:spsr03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     EGC80_04925
DNA repair and recombination proteins [BR:spsr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     EGC80_04925
SSDB
Motif
Pfam: RNase_T Rv2179c-like RNase_H_2 DNA_pol_A_exo1
Other DBs
NCBI-ProteinID: AZG34333
UniProt: A0A3N4E2T7
LinkDB
Position
complement(1158431..1159048)
AA seq 205 aa
MTTLANQVVVLDFETTGLSPDNGDRAIEIGAVKLVDGQIVDTFQELINPGRRVNSFIEQY
TGISNDMLKHAPVSKQVMGQFAKFIDGFNLVAHNASFDKKFLDAEFSQHKLKYSGIFCCS
LLLSRRISQDAPNHKLGTLVDHHQLPNDGVFHRALADATMTSHLWLHQIEVLQQQLPKQP
ITIDMVNKISSLPKAQIARFLRTMS
NT seq 618 nt   +upstreamnt  +downstreamnt
atgacaacactcgctaaccaagttgtggtgctcgattttgaaaccacaggtttgtcaccc
gataatggtgaccgtgccattgaaatcggcgcggtaaaattggtcgatggtcaaatagtc
gatacctttcaggaacttattaatcctggtcggcgagtcaatagctttattgaacaatac
acaggtatcagcaacgacatgctcaaacatgccccagtgtcaaagcaagtaatgggacaa
tttgccaaatttatcgatggatttaatttggtggcacacaatgccagctttgataagaag
tttctcgatgctgaatttagccaacacaagctgaaatattcagggatcttttgctgctct
ttattgttatctcgccgcataagccaagatgcccccaatcataagctcggcacgctagtg
gatcatcatcagttacctaacgatggcgtatttcaccgcgcattagccgacgccaccatg
acaagtcatttatggttacatcaaatagaagtattgcagcaacaacttccaaaacaaccg
attaccattgatatggtcaacaaaatatccagtcttcctaaagctcaaatagcgcggttt
ttacggactatgagctaa

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