Shewanella psychromarinicola: EGC80_05015
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Entry
EGC80_05015 CDS
T09848
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
spsr
Shewanella psychromarinicola
Pathway
spsr00071
Fatty acid degradation
spsr00280
Valine, leucine and isoleucine degradation
spsr00310
Lysine degradation
spsr00362
Benzoate degradation
spsr00380
Tryptophan metabolism
spsr00410
beta-Alanine metabolism
spsr00640
Propanoate metabolism
spsr00650
Butanoate metabolism
spsr00907
Pinene, camphor and geraniol degradation
spsr00930
Caprolactam degradation
spsr01100
Metabolic pathways
spsr01110
Biosynthesis of secondary metabolites
spsr01120
Microbial metabolism in diverse environments
spsr01200
Carbon metabolism
spsr01212
Fatty acid metabolism
Module
spsr_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
spsr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
EGC80_05015 (fadB)
00650 Butanoate metabolism
EGC80_05015 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
EGC80_05015 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
EGC80_05015 (fadB)
00310 Lysine degradation
EGC80_05015 (fadB)
00380 Tryptophan metabolism
EGC80_05015 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
EGC80_05015 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
EGC80_05015 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
EGC80_05015 (fadB)
00930 Caprolactam degradation
EGC80_05015 (fadB)
Enzymes [BR:
spsr01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
EGC80_05015 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
EGC80_05015 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
EGC80_05015 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
EGC80_05015 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
NAD_Gly3P_dh_N
Motif
Other DBs
NCBI-ProteinID:
AZG34351
UniProt:
A0A3N4EDU7
LinkDB
All DBs
Position
complement(1180132..1182282)
Genome browser
AA seq
716 aa
AA seq
DB search
MIYQSPTIQVELLEDNIAKLCFNAQGSVNKFDRETIASLDAALDSIKQNTDIKALLLTSA
KSTFIVGADITEFLTLFQQDDATLLAWVEQASAVFNKLEDLPFPTASAVNGFALGGGCET
ILATDLRVADTNARIGLPETKLGLIPGFGGTVRLPRVIGADNALEWITTAKDQRPEDALK
VGAIDAVVAPENLQAAAIQMLHDALNGSLDWQARRTKKQSPLQLPKLEAMMSFATAKGMV
FSVAGKHYPAPMAAVNVIEHAAGLDRDGALKVEAQAFIKLAKTDVAQALIGIFLNDQFVK
GKAKKAGKLAHDVNQAAVLGAGIMGGGIAYQSASKGTPIVMKDIAQPALELGLNEAAKIL
TTQVARGRSTPEKMAKVLNNITPSLDYAAIKHSDIVVEAVVEHPKVKATVLAEVEQYVSE
DAIIASNTSTISINLLAKSLKKPERFCGMHFFNPVHKMPLVEIIRGEHSSEETIATVVAY
ASKMGKTPIVVNDCPGFFVNRVLFPYFAGFSGLLAEGADFAAVDKVMEKQFGWPMGPAYL
LDVVGLDTGHHAQAVMAEGFPDRMGKNGKDAIDIMFENKRLGQKNAKGFYAYSVDRRGKP
KKDIDPTSYELLHATFGELKAFESDDIIARCMIPMIIETVRCLEEDIIASPAEGDMGLVY
GIGFPPFRGGVFRYLDTMGVANFVALADKYAHLGGLYQVTDAMRALAANNGSYYQA
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgatctaccaaagccctaccattcaggttgagttacttgaagataatattgccaaactg
tgctttaacgcacaaggttcggtaaacaaatttgacagagaaaccatagcctctcttgat
gccgcgctagacagcatcaaacaaaacactgacattaaagccttattgctgacatcagca
aaaagcacttttattgttggcgcagacatcactgaattcttaaccctatttcaacaagac
gatgcaaccttgttagcttgggttgaacaagccagcgcggtattcaataagctagaagac
ttaccgttcccaacggcctctgccgtaaacggttttgcgcttggtggtggttgtgaaacc
attttagcaactgacttacgtgttgcagataccaatgctcgtatcgggttaccagaaaca
aaattaggtcttattcctggttttggtggcacagtgcgattgcctagagtgattggtgca
gataatgcgcttgagtggatcaccacggctaaagatcaacgcccagaagatgccttaaaa
gtaggtgctattgatgccgttgttgcaccagagaatttacaagccgcagcgatccaaatg
ttgcatgatgcacttaatggcagccttgattggcaagcccgacgtaccaaaaagcaatca
ccattacagttaccaaagcttgaagccatgatgtcttttgccacagcgaaaggcatggtg
ttctcagttgcaggcaaacattatcccgcgccaatggccgctgtgaatgttattgaacac
gctgcaggtttagatcgtgatggcgcattaaaagtggaagcacaggctttcattaaattg
gctaaaacagacgttgcccaagccctaattggtattttcttaaatgaccaatttgtaaaa
ggtaaagcaaagaaagccggtaagctggctcatgatgtaaaccaagccgcggtattgggt
gcaggtatcatgggtggtggtattgcataccaaagtgccagcaaaggcacgccgattgtc
atgaaagacatcgctcagccagcattagagttaggcttaaacgaagcagctaaaatcctt
acgactcaagttgctcgaggccgctctacgccagagaaaatggctaaagtattaaacaac
attactccttcattagattatgccgccattaaacatagcgatatcgttgtagaagccgtt
gttgaacatccaaaagtgaaagcgacagtgcttgcagaagtcgaacaatacgtatctgaa
gatgccattattgcgtcaaatacttcgaccatctcaatcaatttattggcaaaaagcctg
aagaaaccagaacgtttctgcggtatgcacttctttaaccctgtgcataaaatgccatta
gttgaaattatccgtggtgagcatagctctgaagaaaccatcgcaaccgtagtggcttac
gctagcaaaatgggcaaaaccccaattgtggtaaatgattgcccaggcttcttcgttaac
cgagtattgtttccatattttgccggctttagtggtctactcgctgaaggtgctgatttt
gctgctgtcgataaagtgatggaaaaacagtttggctggcctatgggcccagcatactta
cttgacgtagtaggtttagataccggtcatcacgcccaagctgtaatggcagaaggcttc
cctgaccgcatgggtaaaaatggcaaagatgctatcgatattatgtttgaaaacaagcgt
ctaggtcaaaaaaatgccaaaggtttctatgcttattctgtcgaccgtcgcggtaaaccg
aagaaagacattgatccaacaagctatgaattattgcacgccacttttggtgaattaaag
gcattcgagtctgatgatattatcgctcgttgtatgatcccgatgatcatcgaaaccgtc
cgttgtttagaagaagatattattgcatcacctgctgaaggcgatatgggtctggtttac
ggtattggtttcccaccattccgcggcggtgtattccgttacttagacaccatgggcgta
gcaaactttgttgccctagcagacaaatacgcacatctgggtggcttgtatcaagttacc
gatgcaatgcgtgcacttgcagccaacaacggtagttactaccaagcctaa
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