Shewanella psychromarinicola: EGC80_05210
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Entry
EGC80_05210 CDS
T09848
Symbol
rlmF
Name
(GenBank) 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF
KO
K06970
23S rRNA (adenine1618-N6)-methyltransferase [EC:
2.1.1.181
]
Organism
spsr
Shewanella psychromarinicola
Brite
KEGG Orthology (KO) [BR:
spsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spsr03009
]
EGC80_05210 (rlmF)
Enzymes [BR:
spsr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.181 23S rRNA (adenine1618-N6)-methyltransferase
EGC80_05210 (rlmF)
Ribosome biogenesis [BR:
spsr03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
EGC80_05210 (rlmF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltransf_10
Methyltransf_12
MTS
Methyltransf_11
NMT
Methyltransf_25
Motif
Other DBs
NCBI-ProteinID:
AZG34385
UniProt:
A0A3N4E2Y9
LinkDB
All DBs
Position
1224483..1225565
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AA seq
360 aa
AA seq
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MTRSTTPPVRAKHDTAKRPPSRSTANINRASVKFSKPVLSKALHPRNAHQQGYDFAALIS
AMPALASFVRPNPYGNDSIDFADPKAVKSLNAALLLSEYHINGWNIPDGYLCPPVPGRVD
YLHYIADLLAVKGKVVKGARIRGLDIGTGANGIYPLLGIQTYGWQFVASDIDPVSIANVA
KIAQQNSKIATHLQLRLQHQPEHIFNGLIATDEQFDVTLCNPPFHRSLAEASEGSLRKVN
NLAKNKQQNQGQKSRKLAASQAKPTLNFGGQKAELWCEGGEQQFLANMIKQSRDYANQVL
WFTSLVSKSENLKPCYQLLKQVNAVEVKTIEMTQGNKATRILAWSFLSPALRQQWVALRP
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgacccgttcaacgacaccgccagtgcgagccaaacatgataccgctaagcgtccgcca
agccggtcgactgccaacattaaccgcgcctcggtaaagttcagcaagcctgtcttatca
aaagcattgcatccgcgtaatgcccatcaacagggttacgactttgccgcattaataagc
gctatgccagcgctagcctcttttgtacgtccaaacccttatggtaatgattctatcgat
tttgccgaccctaaagcggtaaaaagcctcaatgcggcattgctgctgagcgagtatcac
attaatggctggaatattcctgacggatatttgtgcccaccggtgcctggtcgagtggac
tatttacattacattgctgatttattagcggtcaaaggcaaggtggttaaaggggcgcgt
attcgcggattggatatcggcaccggtgcaaatggtatctatccgttacttgggatccaa
acctatggttggcaatttgtggcgtcggatattgatcctgtctctatcgctaatgtcgcc
aagattgcacaacaaaattcaaagattgccacgcatttgcagttaagattacagcatcaa
cccgagcatatctttaacggtctgattgctaccgatgaacagtttgatgtcactttgtgt
aacccgccgtttcatcgttcactcgctgaagcatctgagggatcattacgtaaagttaat
aatttagccaaaaataagcaacaaaaccaggggcaaaaatcgcgtaagttagcggcaagc
caagctaagcctacgcttaattttggtggtcaaaaagcagagctatggtgtgagggcggt
gagcaacaatttttagctaatatgatcaaacaaagccgagattatgctaaccaagtgcta
tggtttacctcattagtctcaaagtcagaaaacctcaaaccttgttatcaattactcaaa
caagtgaacgccgttgaggtgaaaaccatcgagatgacacaaggtaataaagcgacccgc
atattagcgtggagctttttaagccctgcattacgtcaacaatgggtcgcattgcgtcct
taa
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