Shewanella psychromarinicola: EGC80_06035
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Entry
EGC80_06035 CDS
T09848
Name
(GenBank) type II secretion system F family protein
KO
K02653
type IV pilus assembly protein PilC
Organism
spsr
Shewanella psychromarinicola
Brite
KEGG Orthology (KO) [BR:
spsr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
spsr02044
]
EGC80_06035
02035 Bacterial motility proteins [BR:
spsr02035
]
EGC80_06035
Secretion system [BR:
spsr02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
EGC80_06035
Bacterial motility proteins [BR:
spsr02035
]
Pilus system
Pilus assembly proteins
EGC80_06035
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSF
DUF996
Motif
Other DBs
NCBI-ProteinID:
AZG37391
UniProt:
A0A3N4DSW0
LinkDB
All DBs
Position
complement(1377596..1378816)
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AA seq
406 aa
AA seq
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MTKHQPKVFTYQWKGTNRDGQRTSGELKGASIAEVRSVIKAQGVTPKGVRKKSAPLFKTE
KSITAMDIAMITRQIATMLAAGVPLVTTLELLGRGHEKAKVRELLGTILSDVQSGIPLSD
ALRPHRLYFDDLYVDLVAAGEHSGSLDAVFDRIATYREKAEQLKSKIKKAMFYPAAVVIV
AILVTSLLLLFVVPQFEEIFNGFGAELPAFTQFIVGISRWLQASWYFFVIAIVVGIWLFK
KTHRTSQNFRDRIDVLLLKIPVIGDILHKASMARFARTLATTFAAGVPLIDGLESAAGAS
GNYVYRKALLKVRQEVMSGMQMNVAMRTTKLFPDMLIQMVMIGEESGGLDDMLNKVANIY
EMQVDDAVDGLSSLIEPIMMVVIGTLVGGLIVGMYLPIFQMGNIIN
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
ataaccaaacaccaacctaaggtgtttacttaccaatggaagggtaccaatcgtgatggc
cagcgcacgtccggtgagctaaaaggtgcctctattgctgaagtacgcagtgtaataaaa
gcccaaggtgtcaccccaaaaggggtacgcaaaaagtcagccccattatttaaaacagaa
aaaagtatcaccgcaatggacattgcgatgatcactcgccaaatagctactatgcttgct
gcgggcgtgcccttggtcactacccttgaactgcttggccgcggccatgaaaaagctaaa
gtgcgcgaattattgggcactattttatctgatgtccaatccggtattccactttcggat
gcgctaaggccacaccgactatactttgatgatctctatgttgatttagtcgctgccggc
gaacattcaggctcactggatgcggtatttgatcgcatagcaacctatcgcgaaaaagct
gagcagttaaaatcaaaaataaaaaaagccatgttctatccggctgcagtcgttatcgtt
gccatcttagtaacctcgttattattactatttgtggtgccccaatttgaagaaatcttt
aacggttttggtgctgaactgccagcatttacccaatttattgttggcatatcccgttgg
ttgcaagcctcttggtatttctttgttatcgcgattgttgtcggtatctggctattcaaa
aaaacccatagaacatcccagaattttcgtgatcgaatagatgtattgctgctaaaaatc
cccgtgattggtgatattctccacaaagcatcaatggcgcgttttgcccgtactttagca
accacttttgctgctggcgtgccattaatcgatggtctagagtctgccgcgggggcatca
ggaaattacgtttaccgtaaagcgctgttaaaagtgcgccaagaagtgatgtccggcatg
caaatgaatgtggcgatgcgcactaccaaattattcccagacatgctgattcaaatggtg
atgattggtgaagaatccggcggcttggacgacatgctcaataaagtggctaatatttat
gaaatgcaggttgatgatgcggtcgatgggctatctagcttgattgagccgattatgatg
gtggtgataggtactctcgttggtggtctaatcgtcggtatgtatttacctattttccaa
atgggcaacataataaactag
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