Shewanella psychromarinicola: EGC80_06150
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Entry
EGC80_06150 CDS
T09848
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
spsr
Shewanella psychromarinicola
Pathway
spsr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spsr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
EGC80_06150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spsr03400
]
EGC80_06150
Enzymes [BR:
spsr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EGC80_06150
DNA repair and recombination proteins [BR:
spsr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EGC80_06150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Helicase_C
Zn_ribbon_PriA
WHD_PriA
AAA_30
TrwB_AAD_bind
AAA_22
DUF8128
Zn_ribbon_FGT1_1
Thymidylate_kin
MarR
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AZG34545
UniProt:
A0A3N4E1J8
LinkDB
All DBs
Position
complement(1412737..1414932)
Genome browser
AA seq
731 aa
AA seq
DB search
MPVFVEVALPVPLRRNFSYRVKEQHQAGLQIGLRVKVPFGPQQLIGLITAINDSCDLAPQ
QIKSVTAVLDDAPLLPDSLYKLTLWAARYYFTTQGQMLSQALPVALRKGLNAAPQAVIEY
HLSQQGRNADSSVLKRAPAQKKLYELLLANSISHDEFITQQLSKPALKALEQREWIERQQ
KVLSHDLSWRQQLVMNESPHKLNKQQAVAVSVLTQQQGFHCTLLEGITGSGKTEVYLTLL
ETILQQGKQALILVPEIGLTPQTINRFKRRFEVNVAVIHSGLTDNQRLEAWRQARVGEAA
IIIGTRSALFTPMAYPGLIILDEEHDSSFKQQEGVRYHARDLAVMRGHLEDIQVVLGSAT
PSLETLQNALSGRYHHLELSERAGAAQKVKQGIVDITSQPLKAGMSTSLINEMRMHLDAG
NQVLLFLNRRGFAPALLCHECGHLHECDRCDAFFTVHQGLNEICCHHCGNQYAIPRQCHQ
CGSTMLMGHGLGTEQLEQELIKLFPKHPVVRIDRDTTRRKGSLEQQLKGIYMGKYKILVG
TQMLAKGHHFPDVTLVGLLDVDGALFSADFRAPERFGQLYTQVSGRAGRADKPGKVLLQT
HQSDNPILRDLLKRGYGEFARSQLKERQQALLPPAWHMVLIRAEAHLAEDADAFLARTSE
LLPQDKDFEIIGPIPAPLDRKAGKYRRQLILQAKSRQRLQTEFERVLAQIEQIPESKRCR
WSIDRDPQDLM
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtgtttgttgaagtcgccttacccgtccccttgcgcagaaactttagttatcgc
gtaaaagagcaacatcaagcgggattgcaaataggtcttagagttaaagtcccttttggc
cctcaacaactcatcggcctaattaccgctattaatgatagctgtgacttggcaccgcaa
caaattaaatctgtcactgcagtacttgatgatgccccattgttacctgattcgctctat
aaattaaccctatgggccgcccggtattactttaccactcaaggacaaatgctcagccaa
gcgctgccggttgcattgcgaaaaggcctaaacgctgcaccgcaggcggtgattgaatat
catttaagccaacaaggacgcaatgctgattctagcgtattaaaacgtgccccagcacaa
aaaaaactgtatgagttattgctggccaactcaattagccacgatgaattcatcacccaa
caattaagcaaacctgcgctaaaggcattagaacaaagagagtggattgaacggcagcaa
aaagtgctcagccatgatttaagttggcgtcaacagctggtcatgaatgaatcaccccat
aagcttaacaagcaacaagccgtcgcggtgtcggtgctaacgcaacaacaagggtttcat
tgcaccttattagaagggattaccggctcaggtaaaaccgaagtctacctaaccttgctt
gagactattttacaacaaggcaaacaagcacttattcttgttccggaaatcggcttaacc
ccgcaaaccattaatcgctttaaacgccgtttcgaagtcaatgttgcggtgatccactca
ggactaaccgataatcaacgacttgaggcttggcggcaagcgcgtgtgggcgaagcggca
attatcattggtactcgctcagcactctttacgccgatggcctaccctggattaattatt
ctggatgaagagcatgatagtagctttaaacaacaggaaggagtgcgctatcacgcccgt
gacttagcggtaatgcgcggacaccttgaagatatccaggtggttttggggtcggcgaca
ccatcgttagaaaccttacaaaatgcattatcaggacgctatcatcaccttgaactgagc
gaacgcgccggtgcggcccaaaaggtcaagcaaggtattgtcgatattacttcgcagcca
ctaaaagccggcatgtctacatcattgattaatgaaatgcgtatgcaccttgacgcgggt
aatcaggtgcttctgtttttaaaccgccgtggatttgctcccgccttgctgtgccatgaa
tgtggtcacttacatgaatgcgatcgctgtgatgccttttttaccgtccatcaaggctta
aatgaaatatgttgtcatcactgcggcaatcaatacgctattccacgtcaatgccatcaa
tgtggtagcaccatgctaatgggtcacggcttaggcaccgaacaactagaacaagaatta
atcaaactgtttcccaaacaccccgttgtgcgtattgaccgagacaccacgcgaagaaag
ggctcgctagagcagcagttgaagggaatctatatgggaaaatataaaatcctggtcggc
acgcagatgctcgcaaaaggccatcatttcccagatgtgaccttagtcggtttacttgat
gttgacggcgcattattcagtgctgactttcgtgcaccagaacgttttggccagctatat
actcaagtatcgggccgtgctggccgcgcagacaaacccggcaaagtgctactgcaaacc
catcaaagtgataaccccattttacgtgatttattgaaacgcggttatggtgagttcgct
cgcagtcagctaaaagaacgccaacaagcattattaccacccgcatggcacatggtatta
attcgtgcagaagcgcatttagcagaagatgctgatgcttttttagcccgaaccagtgaa
ctattaccacaagataaggactttgaaatcattggcccaattccggccccccttgatcgc
aaagcaggcaaatatcgacgccaattaatactgcaagccaagagtaggcagcgtttacaa
actgaatttgaacgggtattagcccaaattgaacaaatacctgaaagtaagcgttgtcgt
tggagtatcgatcgtgatccgcaggatttgatgtaa
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