Shewanella psychromarinicola: EGC80_07935
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Entry
EGC80_07935 CDS
T09848
Symbol
rapZ
Name
(GenBank) RNase adapter RapZ
KO
K06958
RNase adapter protein RapZ
Organism
spsr
Shewanella psychromarinicola
Brite
KEGG Orthology (KO) [BR:
spsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spsr03019
]
EGC80_07935 (rapZ)
Messenger RNA biogenesis [BR:
spsr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
EGC80_07935 (rapZ)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PapZ_C
RapZ-like_N
AAA_16
Integrase_1
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
AZG34856
UniProt:
A0A3N4E976
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Position
complement(1837777..1838643)
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AA seq
288 aa
AA seq
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MKLVIVSGRSGSGKSVALRVLEDLGYYCVDNLPLPLIGTLLAQLKGSNDLVAISVDVRNI
AEQGKVLQDQLALLEHDTEIISFFLNSNDKVLLKRYSETRRLHPLSKNHISLQEAIKLEG
RLLEPTAKIVDHYIDTSALNIYELSDQVRQILLGSVDKELVINFESFGFKHGMPTEADFM
FDVRFLPNPHWEIELRPLTGLDEPVQEFLGRQPLVNKFIWQIENLFETWMPHLERNNRSY
LTIAIGCTGGQHRSVYIADQLAKRFRQGSKHTVNARHRELSISELTAK
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgaaacttgtcatagtatcgggacgttcaggttcagggaaatccgttgccttaagagta
ttagaagacctaggatattattgtgtcgataatttgcctctacccctcattggcacatta
ctcgctcagctcaagggcagtaatgatttagttgcgattagtgttgatgtccgcaacatt
gctgaacaaggcaaagtgcttcaagaccaattagccctacttgaacatgacactgaaatt
atcagcttctttctaaattccaatgataaagtgttacttaaacgctacagcgaaacacgc
cgattgcacccgttatctaaaaatcatatttcactgcaagaagcgatcaaattagaaggc
cgtttacttgagcctaccgcaaaaattgttgaccattacattgacacttcggcgctaaat
atctacgagttaagcgaccaagttaggcaaatactactaggcagtgtcgataaagaattg
gtcattaactttgagtcttttggctttaagcacggcatgccgactgaagcggattttatg
tttgatgtacgctttttgcccaatccacactgggaaatagaattgcgcccattgacagga
ttagacgaacccgtacaagaatttttagggcgtcagccattggtcaacaagttcatttgg
caaattgaaaacctatttgaaacctggatgccacacctagaacgtaacaatcgcagttac
ctgactatcgcgattggttgtacgggtggccagcatcgttcggtatatattgcagaccaa
ttagcaaaacgatttaggcaaggcagtaaacacactgttaatgctcgccacagagaatta
agtataagtgaactcaccgctaagtga
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