KEGG   Shewanella psychromarinicola: EGC80_07935
Entry
EGC80_07935       CDS       T09848                                 
Symbol
rapZ
Name
(GenBank) RNase adapter RapZ
  KO
K06958  RNase adapter protein RapZ
Organism
spsr  Shewanella psychromarinicola
Brite
KEGG Orthology (KO) [BR:spsr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:spsr03019]
    EGC80_07935 (rapZ)
Messenger RNA biogenesis [BR:spsr03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     EGC80_07935 (rapZ)
SSDB
Motif
Pfam: PapZ_C RapZ-like_N AAA_16 Integrase_1 FtsK_SpoIIIE
Other DBs
NCBI-ProteinID: AZG34856
UniProt: A0A3N4E976
LinkDB
Position
complement(1837777..1838643)
AA seq 288 aa
MKLVIVSGRSGSGKSVALRVLEDLGYYCVDNLPLPLIGTLLAQLKGSNDLVAISVDVRNI
AEQGKVLQDQLALLEHDTEIISFFLNSNDKVLLKRYSETRRLHPLSKNHISLQEAIKLEG
RLLEPTAKIVDHYIDTSALNIYELSDQVRQILLGSVDKELVINFESFGFKHGMPTEADFM
FDVRFLPNPHWEIELRPLTGLDEPVQEFLGRQPLVNKFIWQIENLFETWMPHLERNNRSY
LTIAIGCTGGQHRSVYIADQLAKRFRQGSKHTVNARHRELSISELTAK
NT seq 867 nt   +upstreamnt  +downstreamnt
atgaaacttgtcatagtatcgggacgttcaggttcagggaaatccgttgccttaagagta
ttagaagacctaggatattattgtgtcgataatttgcctctacccctcattggcacatta
ctcgctcagctcaagggcagtaatgatttagttgcgattagtgttgatgtccgcaacatt
gctgaacaaggcaaagtgcttcaagaccaattagccctacttgaacatgacactgaaatt
atcagcttctttctaaattccaatgataaagtgttacttaaacgctacagcgaaacacgc
cgattgcacccgttatctaaaaatcatatttcactgcaagaagcgatcaaattagaaggc
cgtttacttgagcctaccgcaaaaattgttgaccattacattgacacttcggcgctaaat
atctacgagttaagcgaccaagttaggcaaatactactaggcagtgtcgataaagaattg
gtcattaactttgagtcttttggctttaagcacggcatgccgactgaagcggattttatg
tttgatgtacgctttttgcccaatccacactgggaaatagaattgcgcccattgacagga
ttagacgaacccgtacaagaatttttagggcgtcagccattggtcaacaagttcatttgg
caaattgaaaacctatttgaaacctggatgccacacctagaacgtaacaatcgcagttac
ctgactatcgcgattggttgtacgggtggccagcatcgttcggtatatattgcagaccaa
ttagcaaaacgatttaggcaaggcagtaaacacactgttaatgctcgccacagagaatta
agtataagtgaactcaccgctaagtga

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