Shewanella psychromarinicola: EGC80_08120
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Entry
EGC80_08120 CDS
T09848
Symbol
dnaB
Name
(GenBank) replicative DNA helicase
KO
K02314
replicative DNA helicase [EC:
5.6.2.3
]
Organism
spsr
Shewanella psychromarinicola
Pathway
spsr03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
spsr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EGC80_08120 (dnaB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spsr03032
]
EGC80_08120 (dnaB)
Enzymes [BR:
spsr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
EGC80_08120 (dnaB)
DNA replication proteins [BR:
spsr03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
EGC80_08120 (dnaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DnaB_C
DnaB
AAA_25
ATPase
AAA_33
divDNAB
GvpD_P-loop
PAXNEB
nSTAND3
Gal-bind_lectin
Motif
Other DBs
NCBI-ProteinID:
AZG34892
UniProt:
A0A3N4E509
LinkDB
All DBs
Position
1875313..1876719
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AA seq
468 aa
AA seq
DB search
MSQQGAFKARNRQRDVEVNALKLPPHSIEAEQSVLGGLMLDAEAWDRVSEAVVAEDFYSR
SHRMIFMAMQRLMESSQPLDLITVSEQLEIEDQLDDAGGFAYLGEIAKNTPSAGNILSYA
DIVRERAVVRDMIAVAHEIADAGYNPEGRDSSALLDLAESKVFKIAEMRTNANEGPENIK
SILEKTVDRIEQLYNNPHNGVTGVSSGFNDLDKMTAGFQAGDLIIVAARPSMGKTTFAMN
LCEQAAMNEDKPVLIFSLEMPSEQIMMRMLASLGRVDQTKIRTGQLDDEDWARVSSTMGI
MLEQGKMFIDDGSGLTPTDVRSRARRIAREHGGLSMIMIDYLQLMQVPSLKDNRTLEISE
ISRSLKALAKELEIPVIALSQLNRSLEQRADKRPINSDLRESGAIEQDADLIMFIYRDEV
YNDNSEDKGTAEIIIGKQRNGPIGRIRLVFQGHFSRFDNYSGPQFDQD
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgtcacagcaaggtgcttttaaagccagaaacaggcagagagatgtagaagttaatgca
ttaaaattgcctcctcactctattgaagcagaacaatccgttttaggtggattgatgcta
gacgctgaagcgtgggatcgtgtttctgaagcggttgtggccgaagatttttattctcgt
tctcatcgaatgattttcatggctatgcaacgtttaatggagtctagccaacctctagat
ttgattaccgtatccgagcagttagaaattgaagaccaattagacgatgccggcggcttt
gcttatcttggtgaaattgccaaaaacacccccagtgcaggtaacattttatcttacgct
gatattgttcgtgaacgtgctgttgttcgtgacatgatcgctgttgctcacgaaattgct
gatgcgggttataacccagaaggccgtgattcaagtgcattattagatttggctgaaagc
aaagtgtttaaaattgctgaaatgcgtactaatgccaatgaaggcccagaaaacattaaa
agcattcttgaaaaaaccgtcgacaggattgagcagctttacaataatcctcataatggt
gttactggtgtttcaagcggttttaatgatttagataaaatgactgcaggttttcaggct
ggcgatttaattattgttgccgcacgtccttccatgggtaaaacgacctttgcgatgaac
ttgtgtgaacaagccgctatgaatgaagataagccggtgctcattttcagtctggagatg
ccatctgagcagatcatgatgcgtatgttggcgtcgctgggccgagttgatcaaaccaaa
attcgtactggccaactagacgatgaagattgggcgcgcgtgtcatcgaccatgggcatt
atgcttgaacaaggtaaaatgtttatcgatgacggctcaggactcaccccaacagacgta
cgcagtcgtgccaggcgtattgctcgagagcacggtggtttgtctatgatcatgatcgat
tacctacaactaatgcaggtaccgtcgttaaaagataaccgtactttggaaatttcggaa
atttctcgctcgttaaaagcgttagctaaggaactggaaattccggttatcgcgttgtcg
cagctcaaccgctcactagagcagcgtgctgacaaacgtccaattaactctgacttgcgt
gaatcgggtgcgattgagcaggatgccgatttgattatgttcatttatcgcgacgaagtg
tataacgataactctgaagataaaggcactgctgagatcattattggtaaacagcgtaac
ggacccattgggcgtattcgtctagtattccaaggtcatttttctcgttttgataattat
tctggtccacagttcgaccaagattaa
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