Shewanella psychromarinicola: EGC80_08580
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Entry
EGC80_08580 CDS
T09848
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
KO
K19235
L,D-transpeptidase YbiS
Organism
spsr
Shewanella psychromarinicola
Brite
KEGG Orthology (KO) [BR:
spsr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
spsr01002
]
EGC80_08580
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
spsr01011
]
EGC80_08580
Peptidases and inhibitors [BR:
spsr01002
]
Cysteine peptidases
Family C82
EGC80_08580
Peptidoglycan biosynthesis and degradation proteins [BR:
spsr01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
EGC80_08580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldt_C
YkuD
LysM
Motif
Other DBs
NCBI-ProteinID:
AZG34974
UniProt:
A0A3N4EH56
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All DBs
Position
complement(1975073..1975990)
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AA seq
305 aa
AA seq
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MINSLRASLIGATAIILSFSCAAVEYRLPAKGSNLVGENQYYVVPEGKLTLEQIASEFQL
GLTNLLEANPDVDPFLPKVGSTLLIPHQLILPNTKHEGVVINSAEMRLYYFPKGKDTVEV
LPIGIGQIGKDTPENWVTTIQRKRANPTWTPTVNIRKSYAAKGITLPAVWPAGADNPMGL
FALYVGNLYAIHGTNATFGIGLRVSSGCVRLRDEDIEYLFNSIPVGTRVEFINQPIKATE
EPDGNRYLEVHEPLSRTQAEFDSQEPVALLLDKQITRFIAHPDTDSFTLKRLLEQRTGMP
TRINP
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgataaattcgttacgcgcttcgttaattggagcgactgccattatattaagtttttcc
tgtgcagcagttgaatatcgtctacctgccaaaggcagcaatttagtgggtgaaaatcaa
tattatgttgttcctgagggaaagctaaccctagagcaaattgcttcagaatttcagcta
gggttaactaacttattagaagcaaacccagatgttgatccatttttgccaaaagtcggt
agtactttattgatcccacatcagttaattctacctaacactaagcatgaaggtgtggtg
attaacagcgctgaaatgcgtttatattatttccctaaaggaaaagacactgttgaagta
ttgcctatcggtattggtcaaattggtaaagacaccccagaaaattgggtgacaacaata
caacgaaaacgggcaaacccaacttggacacccaccgttaacattcgtaaatcttacgct
gcaaaagggataacattaccggcagtatggcctgctggcgctgataacccaatgggttta
ttcgcactctatgtgggtaacttatatgctattcatggcactaatgccacgtttggtatt
ggtttgcgggtaagttctggttgtgttcgtttgcgtgatgaagacattgaatatttattt
aacagcatacctgttggcactcgcgttgagtttattaaccaaccgattaaagccactgaa
gagcctgatggtaaccgttatctagaagtgcatgagccactatcacgcactcaagctgaa
tttgattcacaagagcccgtggcattattattagataagcaaataactcgctttattgct
cacccagacactgactcattcacattaaagcgtttgcttgaacaacgcaccggaatgcca
actcggattaatccgtaa
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