Shewanella psychromarinicola: EGC80_08910
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Entry
EGC80_08910 CDS
T09848
Symbol
clpB
Name
(GenBank) ATP-dependent chaperone ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
spsr
Shewanella psychromarinicola
Brite
KEGG Orthology (KO) [BR:
spsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
spsr03110
]
EGC80_08910 (clpB)
Chaperones and folding catalysts [BR:
spsr03110
]
Heat shock proteins
HSP100
EGC80_08910 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
ClpB_D2-small
Clp_N
AAA_5
AAA_16
AAA_22
Sigma54_activat
AAA_14
bpMoxR
ATPase_2
nSTAND3
TniB
AAA_18
IstB_IS21
DUF815
AAA_24
AAA_7
NBD_SMAX1
AAA_19
AAA_3
NACHT
AAA_25
ATP_bind_1
DNA_pol3_delta2
UCR_14kD
Motif
Other DBs
NCBI-ProteinID:
AZG35033
UniProt:
A0A3N4E4Q3
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Position
2051122..2053695
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AA seq
857 aa
AA seq
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MRLDRMTNKFQIAISDAQSLALGRDHQFIEPLHLMMALLNQDSGSIHSLLTQAGIRVSAL
RSAISQELERLPQVEGTGGDVQLSQGLIRLLNLCDKLAQKRKDKFISSELFVLAGLENND
PLAKALKDSGASKELMEKTIEDMRGGQKVDDPNAEDQRQALKKFTVDLTERAEQGKLDPV
IGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGIKNKRVLSL
DMGSLIAGAKYRGEFEERLKAVLNELSQEEGRVILFIDELHTMVGAGKGEGAMDAGNMLK
PALARGDLHCVGATTLDEYRQYIEKDAALERRFQKVIVDEPSVEDTIAILRGLKERYELH
HHVEITDPAIVAAATMSHRYISDRKLPDKAIDLIDEAASSIRMQIDSKPEALDRLERRAI
QLKLEEQALSKESDEASRKRLDFLQHELRDVESKAAEMNEIWHTEKAALAGTQHIKADLE
QARMDLEVARRAGDLTRMSELQYGRIPELEKQLDLASQAEMQDMTLLRNKVTDVEIAEVL
SKATGIPVSKMLEGEREKLLHMEDALHQRVIGQNEAVDAVSNAIRRSRAGLADPQRPIGS
FLFLGPTGVGKTELCKALAKFLFDSESALVRIDMSEFMEKHTVSRLVGAPPGYVGYEEGG
YLTETVRRKPYSVILLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIIMTSNL
GSDIIQEGFGHTTYEEMKAGVMNVVTQSFRPEFLNRIDESVVFHPLDAANIKHIASIQFE
LLRKRLIEKEFDIELSDAALSLIAEAGFDPVYGARPLKRALQQEVENPLAQKLLRGQLLP
GKMIKVIVEDGKLAFIQ
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgagactcgatcgtatgactaataagtttcaaattgccatttctgatgcccaatcacta
gcattgggacgcgatcatcaatttattgaacctcttcatttaatgatggcgctattaaat
caagattctggttctattcattctttactcacccaagcgggtattcgcgtaagcgcactt
cgctcagctattagtcaagagttagagcgtttaccgcaagttgaaggtactggtggtgat
gttcagctgtcacagggattaattcgtttactgaatctgtgtgacaaactggctcaaaag
cgtaaagataaattcatttcatcggaattgtttgtcttggccggattggaaaataatgat
ccccttgccaaagcattaaaagactctggtgcaagtaaagaattaatggagaaaaccatc
gaggacatgcgtggcggacagaaagtcgatgatcccaatgctgaagatcaacgccaagca
ttgaaaaaatttaccgttgatttaactgagcgcgctgagcaaggtaaattagaccctgtt
attggtcgtgatgaagagatccgtcgcactattcaagtattacaacgccgcactaaaaat
aacccagtacttattggtgagccaggtgtgggtaaaaccgccattgttgaagggttagcg
caacgtattatcaatggtgaagtccctgaagggattaaaaataagcgggtattatcatta
gacatgggctcgttaattgcgggagccaaataccgcggtgagtttgaggagcgtttaaaa
gcggtcttaaatgagctatcccaagaagaaggccgagtcatcttattcattgatgagtta
cacactatggtgggagccggtaaaggcgagggcgcgatggatgccggtaatatgcttaaa
cccgcgttggctcgtggtgacttgcattgtgtcggggccacaacactcgatgaataccga
caatatattgagaaagatgccgcactagaacgtcgctttcaaaaagtgattgtagatgag
cccagtgttgaagacacgattgccattttacgtggtttaaaagagcgttacgaattacat
caccatgttgagattaccgatcctgctattgtggccgccgctacgatgtcgcatcgttat
atttcagatagaaaattgcctgataaagccatcgatttaattgatgaagcagcgtctagt
atcaggatgcaaattgactctaagccagaagcgctagatcgattagaacgtcgtgcgatt
cagcttaagttagaagaacaagcgttaagtaaagagtccgatgaagccagtcgtaaacgt
cttgattttttacaacatgaattgagagatgttgaaagtaaagcggctgagatgaatgaa
atttggcataccgaaaaagccgcattggcaggcacacagcacattaaggccgatctcgaa
caagcgagaatggacttggaagtggctcgacgcgccggtgacttaactcgaatgtcagaa
ttgcaatatgggcgtattcctgagcttgaaaaacagttggatttagcatcacaagctgaa
atgcaagatatgacattgctgcgtaataaagttactgatgttgaaattgctgaagtgcta
tcaaaagccaccggtattccggtgtcaaaaatgcttgaaggtgaacgagaaaaactgtta
cacatggaggatgcactccaccaacgtgtcatcggtcaaaatgaagccgttgatgcagta
tcgaatgctattcgtcgtagtcgtgctggtcttgccgatcctcaacgtccaatcggttca
tttttattccttggaccgacaggtgtcggtaaaactgagctgtgtaaggcgttagctaaa
tttttattcgatagcgaatccgctttggtacgtatcgacatgtctgagtttatggaaaaa
cacactgtgtcgcgtctagtcggggctcctcccggttatgttggctatgaagaaggcgga
tatttaaccgaaacggtacgtcgtaaaccttactctgtcattttgttagacgaagttgag
aaggcgcatccggatgtatttaatgtattactgcaagtgttagatgatggtcgcttaacc
gatggtcaaggtagaacggtcgattttaaaaacactgtgattattatgacctcaaacctt
gggtcagatattatccaagagggctttggtcatacgacatatgaggagatgaaagccggg
gttatgaatgttgtgacgcaaagtttccgtcccgagtttttaaatcgaatcgatgagtct
gtggtattccatcccttagacgctgcaaacatcaagcatattgccagtattcaatttgag
ttgctgcgcaaacgtttgattgaaaaggagttcgatattgaattgtctgatgcggcatta
tcattaatcgctgaagctggattcgatcctgtttatggtgcaaggccgttaaaacgagca
ttacaacaagaagtagagaatccattagctcaaaaattacttcggggtcaattgctaccg
ggtaaaatgattaaagtcatagtggaagatggcaagctagcatttattcaataa
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