Shewanella psychromarinicola: EGC80_09690
Help
Entry
EGC80_09690 CDS
T09848
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
spsr
Shewanella psychromarinicola
Brite
KEGG Orthology (KO) [BR:
spsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spsr03400
]
EGC80_09690
Enzymes [BR:
spsr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
EGC80_09690
DNA repair and recombination proteins [BR:
spsr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
EGC80_09690
Prokaryotic type
EGC80_09690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AZG35165
UniProt:
A0A3N4E4N9
LinkDB
All DBs
Position
2217722..2219155
Genome browser
AA seq
477 aa
AA seq
DB search
MSNVNSLMWFRQDLRVGDNPALVAACQFAQQHQGKVRAVYIVTPSQWAQHDVAPIQIDFI
QRHVNLLAQSLAALGISLDVLHLEWFSDTQTALNDYLQQHNIDAVFAGNEPEINERRRDS
ALIGQGLPLTLIDQDCVFAAGQVQNLSGDMYKVFTPFAKKWKSIASQKAIVPLAAPAPVA
AALALPAAIEFNCPTHSSDQWAAGEGVAKRILDQFLASQVEDYQAERDFPALEGTSRLSP
FLAIGVMSSRQCVAAILARYPQALVDDTCLAKTWLNELIWREFYHHLLVAFPRLSMNHNF
NELGKAIAWRNNPDEFTAWCDGQTGYPIVDAAMRQLNQTGWMHNRLRMVVASFLTKHLLI
DWRWGERYFRQKLIDGDLAANNGGWQWSAGTGCDAQPYFRVFNPMTQSSKFDPDASFIKR
YVSEVSGWSLADIHQPKSINVNDLFAQRQDDRYPEPIVEHKMARLRAIEVLSALKRG
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacgtaaatagcttaatgtggtttaggcaagacttgcgggttggcgataatcca
gcccttgtggcagcgtgtcaatttgcccaacaacatcaaggcaaggttcgggctgtgtat
attgttactccgtcgcaatgggcgcagcatgatgtggcgccaatacaaattgattttatc
cagcgtcatgtcaatctattagcacagtcgcttgctgccttaggcatatcattggatgtg
ctgcatcttgagtggtttagcgatacccagaccgctttaaatgattacttacaacaacat
aatattgatgctgttttcgctggtaacgagccggaaattaacgaacgtcgccgtgatagc
gcattaattggccaggggttgccactgacgttaatcgatcaagactgcgtatttgcagcc
ggacaagtgcaaaatttgtccggtgatatgtacaaggtgtttaccccatttgctaaaaaa
tggaaaagtattgccagtcaaaaagcgatagtgcctttagccgcgccagcacctgttgct
gcagcgctggcattgccagcggctatcgaatttaattgcccaacacacagcagcgatcaa
tgggctgcaggagagggcgttgcaaagcgaatactggatcaatttttagcaagccaagta
gaagattatcaagccgaaagagattttcctgccctagaaggtactagccgcttatcaccc
tttttagccatcggagtaatgagttcgcgtcaatgtgtagcggcaattttagcgcgttac
ccccaagcgttagtggatgatacttgccttgctaaaacatggctcaatgaactgatttgg
cgtgaattttatcatcatttgctggtggcatttccacgtttatccatgaaccataacttt
aatgaactgggtaaggcgattgcgtggcgcaataatcctgatgagtttactgcctggtgt
gacgggcaaacgggctacccgattgtagacgcagccatgcgccaactaaaccaaacgggc
tggatgcataatcgcttgcgtatggtagtagccagttttttaaccaagcatttattgatc
gattggcgttggggcgaacgttattttaggcaaaaactgattgatggtgatttagccgct
aacaatggcggctggcagtggtctgcaggcacaggctgcgatgcgcaaccttattttcga
gtgtttaatccgatgactcaaagcagcaaatttgatccagatgccagttttataaagcgt
tatgttagtgaggtatcaggttggtctttggctgatattcatcaacctaaatctattaat
gttaatgatctgtttgcacaacgacaagatgaccgatacccagagcctattgtcgaacac
aagatggcgcgacttcgggcgatagaggtgttaagtgcgctaaagcgtggttaa
DBGET
integrated database retrieval system
